Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00874 ATGGTGTGCCAAGAAGAAGTATTGATCTCAAAAGTATGCGAGCTGTACTCAGAAATAGCGAGTCTAGAGTCTCTTAAACCGTGCAAGAATGTGGACACCCTATTCACAGAGCTTGTCCTGACATGCATACCACCAAGCCCGATCGATGTCACAAAGCTCTCAAAGAACCTTCAAGAGATAAGATCCAACCTCATCAGGCTCTGTGGCATAGCCGAGGGTCATTTGGAGCACCACTACTCCGCCATCCTTGGCTCCTACGATAACCCTCTCCACCATCTCCACATCTTCCCTTACTATAAAAACTACCTCAAACTCGCTCTTCTTGAATTCACAATCCTCTCCCAACACTGCGGCCCACAACTCCCCAACAAGATCGCCTTTGTTGGCTCCGGCCCTCTTCCTCTAACTTCCATTGTTCTCGCATCCAACCACCTCCCTTCAACCACTTTCCACAACTATGACATCGACTCTTCCGCCAACTCGAGCGCCATGCGCTTGGTTTCAGGAGATCCTGACTTGTCCAAGCGCATGGCGTTTCACACCAATGATATATTGGATGTGACGAGTTGTTTGGAAGAGTTTGACGTTGTTTACTTGGCGGCGCTTGTGGGAATGGACAAGGAAGAAAAGAACAGAATGATTGATCACTTGTCAAAGTACATGGCACCTGGTGCCGTTCTTATGCTGAGGAGTGCTCATGGCGCTCGTGCTTTTCTGTACCCTGTTGTTGAGCCCTGTGATCTTAGAGGCTTTGAGGTTCTCTCTGTGTTCCACCCTACTGATGAGGTTATCAATTCTCTTGTCATAGCCAGAAAATACCCTCTTTCTGTTGTTGACCAACAACAAGGACTTGCTTCTATGATATTACCCAATAAGTGCTCTGATGAGATTCAAGCCTTCAACCACCCTCTCAATCATGGCAACATCATCATTGAGGAATTAACCCTTGACGATCAACTCTGA 963 0.4714 MVCQEEVLISKVCELYSEIASLESLKPCKNVDTLFTELVLTCIPPSPIDVTKLSKNLQEIRSNLIRLCGIAEGHLEHHYSAILGSYDNPLHHLHIFPYYKNYLKLALLEFTILSQHCGPQLPNKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDIDSSANSSAMRLVSGDPDLSKRMAFHTNDILDVTSCLEEFDVVYLAALVGMDKEEKNRMIDHLSKYMAPGAVLMLRSAHGARAFLYPVVEPCDLRGFEVLSVFHPTDEVINSLVIARKYPLSVVDQQQGLASMILPNKCSDEIQAFNHPLNHGNIIIEELTLDDQL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00874 320 Gene3D Vaccinia Virus protein VP39 6 274 IPR029063 -
Aip06g00874 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 260 IPR029063 -
Aip06g00874 320 Pfam Nicotianamine synthase protein 5 274 IPR004298 GO:0030410|GO:0030418
Aip06g00874 320 PANTHER SYNTHASE, PUTATIVE-RELATED 1 320 - -
Aip06g00874 320 PANTHER NICOTIANAMINE SYNTHASE 3 1 320 IPR004298 GO:0030410|GO:0030418
Aip06g00874 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00874 Aip-Chr6 11971467 11972732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00874 3 272 Nicotianamine Synthase Gene Family AT1G56430 68.015 1.67e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00874 K05953 - gmx:100794250 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00874 06 11971467 11972732 Aip06g00874 06 11971467 11972732 ECH