Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00867 ATGTCTCTGCGACCGAGTGCCAACTCTCGCTCGGAGACGAGGAAGAAGTCCTACAAGATCGGCGTCGACGCCGACGAGGCTCGTCGCCGGAGGGAGGACAACCTGGTCGAGATCAGGAAGAACAAGCGCGAGGACAGTCTTCTAAAGAAACGAAGGGAGGGCCTTCTCCTTCACCCTCATTTGCCCAGTAACAACAATAACCATGCCCCTTCTCCTTCCTTCCCCGCCAACCGGGTATGTATATATGATTCACAATCAATTTCAATCTTACGTTTGTCACGATCTGCACAATTAGAAGCAACTACTCAGTTTAGAAAGCTATTATCAATTGAACGCAGCCCTCCAATTGATGAGGTCATTAAGGCAGGTGTTGTCCCTAGGTTTGTGGAGTTTTTGGGAAGGCATGATCTACCACAGTTGCAATTTGAGGCTGCATGGGCTCTAACAAATGTTGCATCTGGAACATCTGAGCACACAGGAGTTGTCATTAAACATGGTGCTGTTCCCCTGTTTGTGCAGCTTCTGAGCTCTGGCAGTGATGACGTTAGAGAACAGGCAGTATGGGCCTTGGGTAATGTTGCTGGTGACTCCCCAAACTGTAGGGATCTTGTTCTAAGTCATGGTGCACTCATGCCATTACTGTCTCAATTGAATCAACATTCTAAACCATCTATGTTGAGGAATGCTACATGGACTTTGTCTAATTTCTGCCGTGGAAAGCCTCCAACACCCTTTGAACAGGTAAAGCCTGCCTTGCCTGTTCTTCGGGAGCTCATTTACTTGAATGATGAAGAAGTTCTAACAGATGCGTGCTGGGCTCTATCTTACCTTTCAGATGGCCCAAATGAAAAAATTCAAGCTGTAATTGAAATAGGAGTATGCCCAAGACTTGTGGAGCTCTTGCTACATCCATCACCTACAGTTCTTATACCTGCTCTTCGAACTGTAGGAAATATTGTTACCGGTGACGATGCTCAGACTCAGTTTGTAATTGATAAAGGAGTTCTCCCCTGTCTTCACCAACTTCTTTCGCAAAATAACAAGAAAAACATCAGGAAAGAAGCTTGTTGGACGATATCAAATATCACAGCTGGGAATAGAATTCAAATACAGGCTGTCATTGAGGCCAACGTTATTCCTCCTCTTGTCAATCTTCTTCAGAATGCAGAATTTGAAATCAAGAAGGAAGCTGCATGGGCTATTTCCAATGCAACTTCTGGAGGATCTCATGAGCAGATTCAGTTCCTGGCAAGTCAAGGTTGCATCAAGCCATTGTGTGATCTATTGACATGTCCCGACCCAAGGATTGTGACAGTTTGTCTTGAGGGGCTGGATAACATTTTAAAGGTTGGAGAAGCTGACAAGGAAATGGGACACAACGGCGGGATCAATATTTTCGCTCAAATGGTTGACGAATGTGAAGGATTGGATAAGATCGAAAATCTGCAGACCCATGACAACAATGAGATTTATGAGAGGGCTGTGAAGATTTTGGAGAGATATTGGGCTGAGGATGAATTGGAAGTTGAGCAGAGTCAGAATGGCGGGGATGGTACTCAGCAAGGTTTTTCTTTTGGGACTAACCATCCCACCCTCCCGCCAGGTGGTTTTAACTTCGGGTGA 1623 0.4547 MSLRPSANSRSETRKKSYKIGVDADEARRRREDNLVEIRKNKREDSLLKKRREGLLLHPHLPSNNNNHAPSPSFPANRVCIYDSQSISILRLSRSAQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDLPQLQFEAAWALTNVASGTSEHTGVVIKHGAVPLFVQLLSSGSDDVREQAVWALGNVAGDSPNCRDLVLSHGALMPLLSQLNQHSKPSMLRNATWTLSNFCRGKPPTPFEQVKPALPVLRELIYLNDEEVLTDACWALSYLSDGPNEKIQAVIEIGVCPRLVELLLHPSPTVLIPALRTVGNIVTGDDAQTQFVIDKGVLPCLHQLLSQNNKKNIRKEACWTISNITAGNRIQIQAVIEANVIPPLVNLLQNAEFEIKKEAAWAISNATSGGSHEQIQFLASQGCIKPLCDLLTCPDPRIVTVCLEGLDNILKVGEADKEMGHNGGINIFAQMVDECEGLDKIENLQTHDNNEIYERAVKILERYWAEDELEVEQSQNGGDGTQQGFSFGTNHPTLPPGGFNFG 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00867 540 PANTHER IMPORTIN SUBUNIT ALPHA 10 528 - -
Aip06g00867 540 PANTHER IMPORTIN ALPHA 10 528 - -
Aip06g00867 540 MobiDBLite consensus disorder prediction 508 540 - -
Aip06g00867 540 PIRSF Importin_alpha 5 539 IPR024931 GO:0005737|GO:0006606|GO:0061608
Aip06g00867 540 Pfam Importin beta binding domain 14 62 IPR002652 GO:0006606|GO:0061608
Aip06g00867 540 Gene3D - 13 52 IPR036975 GO:0006606
Aip06g00867 540 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 334 366 IPR000225 GO:0005515
Aip06g00867 540 Pfam Armadillo/beta-catenin-like repeat 282 320 IPR000225 GO:0005515
Aip06g00867 540 Pfam Armadillo/beta-catenin-like repeat 369 405 IPR000225 GO:0005515
Aip06g00867 540 Pfam Armadillo/beta-catenin-like repeat 156 194 IPR000225 GO:0005515
Aip06g00867 540 Pfam Armadillo/beta-catenin-like repeat 113 153 IPR000225 GO:0005515
Aip06g00867 540 Pfam Armadillo/beta-catenin-like repeat 251 278 IPR000225 GO:0005515
Aip06g00867 540 Pfam Armadillo/beta-catenin-like repeat 410 447 IPR000225 GO:0005515
Aip06g00867 540 Pfam Armadillo/beta-catenin-like repeat 197 238 IPR000225 GO:0005515
Aip06g00867 540 Pfam Armadillo/beta-catenin-like repeat 323 364 IPR000225 GO:0005515
Aip06g00867 540 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 377 405 IPR000225 GO:0005515
Aip06g00867 540 MobiDBLite consensus disorder prediction 9 26 - -
Aip06g00867 540 Pfam Atypical Arm repeat 464 508 IPR032413 -
Aip06g00867 540 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 123 166 IPR000225 GO:0005515
Aip06g00867 540 MobiDBLite consensus disorder prediction 512 528 - -
Aip06g00867 540 SUPERFAMILY ARM repeat 14 504 IPR016024 -
Aip06g00867 540 MobiDBLite consensus disorder prediction 1 26 - -
Aip06g00867 540 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 166 208 IPR000225 GO:0005515
Aip06g00867 540 SMART arm_5 112 153 IPR000225 GO:0005515
Aip06g00867 540 SMART arm_5 409 449 IPR000225 GO:0005515
Aip06g00867 540 SMART arm_5 323 364 IPR000225 GO:0005515
Aip06g00867 540 SMART arm_5 155 195 IPR000225 GO:0005515
Aip06g00867 540 SMART arm_5 366 406 IPR000225 GO:0005515
Aip06g00867 540 SMART arm_5 196 238 IPR000225 GO:0005515
Aip06g00867 540 SMART arm_5 240 279 IPR000225 GO:0005515
Aip06g00867 540 SMART arm_5 281 321 IPR000225 GO:0005515
Aip06g00867 540 Gene3D - 92 503 IPR011989 -
Aip06g00867 540 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00867 Aip-Chr6 11839300 11843434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00867 171 428 U-box Gene Family AT1G23030 25.385 5.50e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00867 K15042 - vvi:100263083 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00867 06 11839300 11843434 Aip06g00867 06 11839300 11843434 ECH