Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00857 ATGGCGAGAGGTCTCATTCCAGTGTTATCAATGATTCTTGTTCAGTTGGCGTATGCAGGGATGAGTATTACCTCAAAGCTTGCCATAGAAGGTGGCATGAACCCTCTTATCCTTGTTGCTTATCGTCAAATCTTTGCCACTATTGCCATTGCTCCCTTCACTTATTGGCTCGAATGGAAAACAGTTCCGAGGATGACAAGGCGCGTTATGCTCCAAATAGTACTTTCTTCCATAACAGGAATAACAGGAAACCAGGTTCTGTTCTTCGTGGGTCTAAAATATTCAACTGCCACAGTTGCGTGTGCACTCACCAATTTGCTCCCAGCTTTTACGTTTGTCCTGGCAGCCATCTTCAGACAAGAGAGTGTGGGAATGAAGAGCAAAGCAGGGGTAGGAAAGGTGTTAGGAACAGTATTGTGTGTAGGTGGAGCACTGCTTTTATCATTCTACCACGGCAAAACAATTGGTATAGCAGAATCAAGCATTCGTTGGAGCTTTGCGGAGAGAATGGAAGGAAGAAGCAGCTCCAACGGGAACGAAAGCGCGCTTCTGGGTCCTTTTCTTCTTGTGTTTAGTGCCCTTGTTTGGTCACTTTGGTTCATAATTCAAGCAGACATAAGCAAGAATTTCCCTGCTCCATATACGAGCACAAACTACATGTGTTTCTTGGCCAGCATCCAGTGTGTCCTTCTTGCCTTGTCTTTTGACCATACCCCCTCTTCTTGGTCCCTTCATGATCCTATCAGACTTGTCTCTTCTCTTTATGCGGGGGTAGTTTGCACTGGTCTAGCGTACTGTCTCATGTCATGGACCATTGAGAGGAAAGGTCCTTTGTACGTTTCAGTATTTAGTCCATTGCAACTTGTTCTCACTGCTGTTGCTAGCTGGGCATTGCTTCGGGAGAAACTATACATTGGAACTGTGATAGGGTCTGTGCTGATAGTTGGAGGGCTATATTGTGTTCTATGGGGAAAGAACAAAGAGATGAACGAGATCATTGCTGAAAAAGAGACAATCAAGTACAACGAGAGTAATGCAAAGAATAGTGATTTGGAGTTACCATCTTACATACCATCCAACAATGGTAATCATCTTGTAATTGTGGATGTTGCTTAA 1116 0.4409 MARGLIPVLSMILVQLAYAGMSITSKLAIEGGMNPLILVAYRQIFATIAIAPFTYWLEWKTVPRMTRRVMLQIVLSSITGITGNQVLFFVGLKYSTATVACALTNLLPAFTFVLAAIFRQESVGMKSKAGVGKVLGTVLCVGGALLLSFYHGKTIGIAESSIRWSFAERMEGRSSSNGNESALLGPFLLVFSALVWSLWFIIQADISKNFPAPYTSTNYMCFLASIQCVLLALSFDHTPSSWSLHDPIRLVSSLYAGVVCTGLAYCLMSWTIERKGPLYVSVFSPLQLVLTAVASWALLREKLYIGTVIGSVLIVGGLYCVLWGKNKEMNEIIAEKETIKYNESNAKNSDLELPSYIPSNNGNHLVIVDVA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00857 371 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Aip06g00857 371 Pfam EamA-like transporter family 6 148 IPR000620 GO:0016020|GO:0016021
Aip06g00857 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 327 - -
Aip06g00857 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 150 - -
Aip06g00857 371 PANTHER WAT1-RELATED PROTEIN 6 341 IPR030184 GO:0016021|GO:0022857
Aip06g00857 371 PANTHER WAT1-RELATED PROTEIN 6 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00857 Aip-Chr6 11690521 11694280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00857 5 363 Nodulin-like Gene Family AT1G09380 56.749 4.14e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00857 - - gmx:100801512 514.227