Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00852 ATGAAGGAGAGGACGACGCCGGCTAGGGCTCTGCCGCGCAGACCATCGTCGTTGCGTGCGCTGACCGTCGCCTCGCATCGCCATCTTGTGCACTCATCGTCGCCGCTCAGCATCATCGTCGCATGTGCTCACTGTCGCTGCTCAGCATCATCGTCGTCGCTCAGCATCGTCATCGCCGCTCACCTGAGAAGAAATGACCTTGCTGCTTTAATTGATAGTTCACAGTTTCATTTGAATTTCTGGATATATTATAATCAGTTCATATATACAAAATCCACCAATATCATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGAGAAGATGTTTTTTGAGGGTGAAGTTAGGAATTGAGAACTTGCTGGTTACCAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCACATGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTAAACTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGTCCTGGTTTTTGTGAATCTACTTCAAGTTTCAAATGGCACTTTCAAACATGTGCTACTGACCTACTGTACCAATTTCAATATGATAATGCCTGA 861 0.4332 MKERTTPARALPRRPSSLRALTVASHRHLVHSSSPLSIIVACAHCRCSASSSSLSIVIAAHLRRNDLAALIDSSQFHLNFWIYYNQFIYTKSTNIMVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNESLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDRRRCFLRVKLGIENLLVTKDIIKIADFGLAHEISSQPPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAKLFSLRPLFPGASPGFCESTSSFKWHFQTCATDLLYQFQYDNA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00852 286 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 172 256 - -
Aip06g00852 286 Gene3D Transferase(Phosphotransferase) domain 1 181 256 - -
Aip06g00852 286 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 172 256 - -
Aip06g00852 286 SUPERFAMILY Protein kinase-like (PK-like) 129 257 IPR011009 -
Aip06g00852 286 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 99 122 IPR015940 -
Aip06g00852 286 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 128 174 - -
Aip06g00852 286 ProSiteProfiles Protein kinase domain profile. 1 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00852 286 CDD UBA_SnRK1_plant 100 129 - -
Aip06g00852 286 Gene3D Phosphorylase Kinase; domain 1 109 160 - -
Aip06g00852 286 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 128 174 - -
Aip06g00852 286 Pfam Protein kinase domain 182 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00852 Aip-Chr6 11614822 11617847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00852 131 256 Core Cell Cycle Gene Families AT3G48750 37.662 5.99e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip06g00852 Pkinase 8.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00852 K08829 - gmx:100810150 218.394