Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00851 ATGGCGTCTGTTGGTATGGCACCAACATCAGGCGTGAGAGAATCAGGTGGCGGCGTTGATAGATTGCCGGAAGAGATGAACGATATGAAAATTAGGGATGATAAGGAAATGGAAGCTACAGTTGTTGATGGCAATGGAACGGAGACCGGCCATATCATTGTAACTACTATTGGTGGTAGAAATGGTCAACCAAAGCAGACTATAAGTTACATGGCAGAGCGGGTTGTTGGGCATGGATCATTTGGGGTTGTCTTCCAGGCTAAATGCTTGGAGACTGGTGAAACTGTAGCTATCAAAAAGGTTCTTCAAGATAAGAGGTATAAGAATCGGGAGCTTCAGACAATGCGTCTGCTTGACCACCCAAATGTTGTCTCTTTGAAGCATTGTTTCTTTTCAACCACTGAAAAGGATGAACTATACCTTAATTTGGTACTAGAGTATGTTCCTGAAACAGTTAGCCGTGTGATCAAACATTACAACAAGTTGAGCCAAAGGATGCCACTAATATATGTGAAACTCTATACGTACCAGATCTTTAGGGCACTATCTTATATACATCGCTGCATTGGAGTCTGCCATCGGGATATCAAGCCTCAAAATCTATTAGTCAATCCACATACCCACCAGGTTAAATTATGTGACTTTGGGAGTGCAAAAGTCTTGGTAAAAGGTGAACCAAATATATCATACATATGTTCTAGATACTATAGAGCACCTGAGCTTATATTTGGAGCCACTGAATATACCACAGCTATTGATGTTTGGTCTGTTGGTTGCGTATTGGCTGAGCTTCTGCTTGGACAGCCTTTGTTCCCTGGTGAGAGTGGAGTTGATCAACTTGTTGAGATCATCAAAGTTCTGGGCACTCCAACAAGGGAAGAGATTAAGTGCATGAACCCTAACTATACAGAATTTAAATTCCCACAGATTAAAGCACATCCATGGCACAAGATATTCCATAAGCGCATGCCTCCAGAAGCTGTTGATTTGGTCTCAAGACTACTACAATACTCACCTAATCTGCGTTGCTCAGCTTTAGATGCCTTGACCCATCCTTTCTTTGATGAACTACGTGATCCAAATGCTCGCTTACCAAATGGTCGTTTCCTTCCACCATTATTCAATTTCAAAGCTCATGAACTGAAGGGGGTTCCAGCCGAGGTATTGGTGAAATTGATTCCAGAGCTTTCAATGTCCCTCATCTCATTCTCTCCTTCTCCATCACCTGAGGGAACTGGTGAAATTGTCGAAAGATCTCTTGTTTTCGATGTAAGATCTTTTGGTGCAGTTGGGGATGGTGTCTCTGATGATACACAAGCATTTCAGTTGGCTTGGGACACAGCATGTCGAGCCGAAGAATCGCGAAGTCTCCTTGTTCCCAAGGGTAATGTCTTCATGATACAATCTACTATATTCACAGGGCCTTGTCTATCTGGCCTTACTTTTAAGGTTGAAGGTACTATTATGCCACCCGATGGACCTGATTCATGGCCGAAGAATAAAAGCAAGAAACAATGGCTGGTTTTCTATAGAATCAATGGATTGACAATGAAGGGAGGTGGTCTTATTGATGGTAGGGGAGAGAAATGGTGGAACCTCCCTTGCAAGCCTCACAAAGGTATTAATGGAACAACACTACCAGGTCCATGTGATAGTCCTGTGGCCATCAGGTTCTTTATGAGTTCTAATTTGAGAATAGAAGGACTAAAAATTAAGAACAGTCCAAAATTCCATTTCAGATTTGAAGATTGCCAAAATGTACATATTGAAAAGCTTATCATAAGATCACCTGCTCTGAGCCCCAACACTGATGGGATTCACATTGAGAACACAAACAATGTTAGGATTTACAATTCACTCATTTCCAATGGTGATGACTGTGTGTCCATTGGAGCCGGTTGTTACAATGTGGACATCAAGAATATCAAGTGTGGTCCAAGTCATGGAATTAGCATTGGGAGCCTAGGGAACTACAACTCGCGAGCTTGTGTGTGGAACATCACAGTGAGTGAGTCAGTTATTAAGAACTCTGATAATGGTGTTCGGATCAAAACATGGCAAGGTGGAAGAGGTTCAGTGTCAATGGTAACCTTCGAGAGCATTCACATGGACAATGTCCGCAACCCAATCATCATAGACCAATACTATTGCCCCTTAAAGAACTGCATCAACCAAACTTCTGCGGTTTCAGTGTCCAATGTGTCATACTCAAACATAAGAGGCACTTACGATTTCAGAAGCTTCCCTATGCGCTTTGCATGCAGTGATTCTGTTCCATGCACAGATATTATGCTTTCTCAAGTGGAATTGTTTCCTTCACAAGAAGGCCATATTTTGACCAACCCCTTTTGCTGGAATGTTTATGGCACTGTGAGCACACTGACAACACCACCACTTTTATGCCTTCAAGAGGGACCTCCATTAATGCTGCCTCAACATGATGTTGTGCCGTGTTATTAG 2460 0.4244 MASVGMAPTSGVRESGGGVDRLPEEMNDMKIRDDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVSRVIKHYNKLSQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCSALDALTHPFFDELRDPNARLPNGRFLPPLFNFKAHELKGVPAEVLVKLIPELSMSLISFSPSPSPEGTGEIVERSLVFDVRSFGAVGDGVSDDTQAFQLAWDTACRAEESRSLLVPKGNVFMIQSTIFTGPCLSGLTFKVEGTIMPPDGPDSWPKNKSKKQWLVFYRINGLTMKGGGLIDGRGEKWWNLPCKPHKGINGTTLPGPCDSPVAIRFFMSSNLRIEGLKIKNSPKFHFRFEDCQNVHIEKLIIRSPALSPNTDGIHIENTNNVRIYNSLISNGDDCVSIGAGCYNVDIKNIKCGPSHGISIGSLGNYNSRACVWNITVSESVIKNSDNGVRIKTWQGGRGSVSMVTFESIHMDNVRNPIIIDQYYCPLKNCINQTSAVSVSNVSYSNIRGTYDFRSFPMRFACSDSVPCTDIMLSQVELFPSQEGHILTNPFCWNVYGTVSTLTTPPLLCLQEGPPLMLPQHDVVPCY 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00851 819 Gene3D - 416 802 IPR012334 -
Aip06g00851 819 CDD STKc_GSK3 65 357 IPR039192 -
Aip06g00851 819 Gene3D Transferase(Phosphotransferase) domain 1 150 397 - -
Aip06g00851 819 Pfam Protein kinase domain 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00851 819 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 397 - -
Aip06g00851 819 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00851 819 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00851 819 Gene3D Phosphorylase Kinase; domain 1 54 149 - -
Aip06g00851 819 SMART pbh1 611 632 IPR006626 -
Aip06g00851 819 SMART pbh1 634 654 IPR006626 -
Aip06g00851 819 SMART pbh1 664 685 IPR006626 -
Aip06g00851 819 SMART pbh1 693 714 IPR006626 -
Aip06g00851 819 SMART pbh1 584 610 IPR006626 -
Aip06g00851 819 ProSitePatterns Protein kinases ATP-binding region signature. 76 100 IPR017441 GO:0005524
Aip06g00851 819 ProSitePatterns Polygalacturonase active site. 641 654 IPR000743 GO:0004650|GO:0005975
Aip06g00851 819 Pfam Glycosyl hydrolases family 28 449 774 IPR000743 GO:0004650|GO:0005975
Aip06g00851 819 SUPERFAMILY Pectin lyase-like 417 809 IPR011050 -
Aip06g00851 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Aip06g00851 819 SUPERFAMILY Protein kinase-like (PK-like) 69 379 IPR011009 -
Aip06g00851 819 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 397 - -
Aip06g00851 819 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00851 Aip-Chr6 11581750 11589217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00851 421 818 Glycoside Hydrolase AT1G02460 65.423 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Aip06g00851 Glyco_hydro_28 4.1e-91 CL0268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00851 K00924 - gmx:100780226 786.178