Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00850 ATGGATCTCGGTGCAGAATTTCATGCAGCAAGTTGGGGAAAGGAGTTTGTAGCAGGAGGATTTGAAAGAATTGCTGGGATAGTATCTGGTCATCCATTAGACACAGTTCGAATAAGGCAACAGGTCTTAAACACCGGTGGCCATGGCTCATCATCAACATTCACCATTCTTAGAAATGCTTTGGCTAAGGAAGGACCTGCTTCTCTCTATTGTGGCATGGGTGCACTTTTGGCCTCTGTTACATTTCAAAATGCTATGGTTTTTCAAACTAATGCAATTCTCTCAAGGGTATTTGGCAAATCTATTTCTCCTAATGACCCTCCTTCTTTCAAGGGTGTAGCATTAGGAGGAGTTGGCACATGTGTCCTCTAG 372 0.4328 MDLGAEFHAASWGKEFVAGGFERIAGIVSGHPLDTVRIRQQVLNTGGHGSSSTFTILRNALAKEGPASLYCGMGALLASVTFQNAMVFQTNAILSRVFGKSISPNDPPSFKGVALGGVGTCVL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00850 123 Pfam Mitochondrial carrier protein 11 100 IPR018108 -
Aip06g00850 123 SUPERFAMILY Mitochondrial carrier 11 117 IPR023395 -
Aip06g00850 123 Gene3D Mitochondrial carrier domain 3 123 IPR023395 -
Aip06g00850 123 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 122 - -
Aip06g00850 123 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 97 IPR018108 -
Aip06g00850 123 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00850 Aip-Chr6 11550446 11550817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00850 1 120 Antiporters AT1G79900 63.333 1.27e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00850 K15109 - pop:7470550 156.377