Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00845 ATGGGTGGTAATCTTAATGCTGAATTATCCAAGAAAACTCCATTTCTTGGCCTCAAGGTTTGGGAAATAGTTGGAGTTGTGGTTGGATTGTCTATTATTATGATCCTCTCCTTGCTCTCACTGTGTCTTACCTCAAGGAAGAAATCTAGAAAATCCAATGATAAGAACATTCCTGTTAGTCAGATACCAACTGTCTCAAAGGAAATCAAGGAAGTGCGGGTTGAGCAAGTATCACCGAATGGGTTTGCTTCCCATGATGGAATACTTCTTACCATTCATGACAAAACCGACGACAAAGAATCAGACAAGGTCATGGTTCATTTAGGTGTGGGGAAGATGAAGAATAATGGGGGTAGTAGCAGCCAATTAGGCTCATTTCATCCCATAGAGAAAGATGGAGGTGGGTCACTTTCTGGAGAAGATGGTAGCTTCGGCACGGTTGCGGTGCACAACCACTCTTCTTCTTACCCTATAACAGCTCCTTCGCCTCTGTCTGGCCTCCCAGAGTTCTCTCACTTGGGCTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCTACGAACCGTTTTTCCAAAGACAATGTCATCGGTGAAGGTGGTTATGGAGTTGTTTACCGTGGACAGTTGATCAACGGGACACCGGTGGCAGTTAAAAAGATACTCAACAACATTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCCATTGGACATGTCCGGCACAAAAACTTGGTTCGCCTTTTGGGGTACTGCATTGAAGGGACTCACAGGATGTTAGTCTATGAGTATGTGAATAATGGAAACTTGGAGCAATGGCTTCATGGAGGTATGCGTCACCATGGATATCTTACCTGGGAAGCGCGTATCAAGATTCTCCTTGGCACGGCCAAAGCGCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATAAAGTCAAGTAATATATTAATTGATGATGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCAAAGTTATTGGGTGCTGGAAAGAGTCATGTCACAACACGAGTTATGGGAACCTTTGGGTATGTGGCTCCTGAATATGCAAATACTGGCCTTCTTAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTACTGGAAGCAATTACCGGAAGAGATCCAGTAGACTATGGACGCCCAACACATGAAGTGAATCTGGTTGATTGGCTGAAGATGATGGTTGGAAACAGGAGATCAGAAGAAGTGATGGATCCAAACATTGAGACAAAACCATCAATCAGAGCTTTAAAACGGGCACTCTTAACTGCTTTAAGATGCTTGGATCCAGATTCTGAGAAAAGGCCCAAGATGAGCCAAGTTGTGCGTATGCTGGAGTCAGAAGAATACCCTTTAGCAAGAGAGGACCGGAGGAACAGAAGAAACCGAGGGGAAAGTGGTGATATTGATTCCCAAAAGGATTATTCTGACACAGACAAGAGTGAGATTCAAGGTTCTAGATAA 1515 0.437 MGGNLNAELSKKTPFLGLKVWEIVGVVVGLSIIMILSLLSLCLTSRKKSRKSNDKNIPVSQIPTVSKEIKEVRVEQVSPNGFASHDGILLTIHDKTDDKESDKVMVHLGVGKMKNNGGSSSQLGSFHPIEKDGGGSLSGEDGSFGTVAVHNHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGGMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGNRRSEEVMDPNIETKPSIRALKRALLTALRCLDPDSEKRPKMSQVVRMLESEEYPLAREDRRNRRNRGESGDIDSQKDYSDTDKSEIQGSR 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00845 504 MobiDBLite consensus disorder prediction 450 498 - -
Aip06g00845 504 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Aip06g00845 504 Pfam Protein kinase domain 192 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00845 504 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00845 504 PANTHER OS01G0323000 PROTEIN 3 501 - -
Aip06g00845 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Aip06g00845 504 SUPERFAMILY Protein kinase-like (PK-like) 175 467 IPR011009 -
Aip06g00845 504 CDD STKc_IRAK 197 463 - -
Aip06g00845 504 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00845 504 MobiDBLite consensus disorder prediction 450 504 - -
Aip06g00845 504 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Aip06g00845 504 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 501 - -
Aip06g00845 504 Gene3D Transferase(Phosphotransferase) domain 1 267 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00845 Aip-Chr6 11472498 11477460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00845 168 497 Trihelix Transcription Factor Family AT1G70460 47.463 2.83e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip06g00845 Pkinase 7.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00845 - - gmx:100787014 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00845 06 11472498 11477460 Aip09g01484 09 27437677 27441665 ECH
Aip06g00845 06 11472498 11477460 Aip06g00845 06 11472498 11477460 ECH
Aip09g01484 09 27437677 27441665 Aip06g00845 06 11472498 11477460 PCT