Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip06g00839 | ATGGGCGGAGGTGGACCGAACGCGGAGGCACAGTATTCGACGGCCAAGACCTCCGTGTGGTGGGACATAGAGAACTGCCACGTTCCTAAAGGCTGCGATCCCCACGCCATCGCTCAGAACATCAGCTCTGCACTGGTCCGCATGAATTACTGTGGTCCCGTCTCCGTCTCCGCCTACGGCGACACCACTCGTATCCCCGCCTCTGTACAGCACGCTCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCTGGCGTTAAAGATGCTAGCGACAAGAAGATTCTTGTTGACATGCTGTTTTGGGCAGTGGACAATCCCGCACCTGCTAATTATTTATTAATTTCTGGCGACAGAGACTTCTCTAATGCTCTCCATCAACTGCGGATGAGAAGATATAATATTCTTCTTGCGCAACCTCAGAAAGCATCTGCACCACTAGTAGCAGCTGCTAAGAGTGTATGGCTCTGGACTAGTCTTTTAGCTGGAGGGCCTCCTCTAACTAATGGCGAATCACAACAACTTGGTAATAATAGCCTTGTAACAAGTTCCGACACCTTAACAATTCCAGTCACTAGTGTCGCTCAGACACAGCCACAGGCTGATTCCTACACCGAAGTGCATGTAGGAAATCAGAAGTTTCCAAATGGAGGAGGAAGGGGATACGATCCTAGGTATCAGGGGAAAACAAATTGGAGAAACTCGGGTCAGACAAATGGACCCAAGGCCATGAATCCACCGCCAGTTGGGCATCAAGATAGTCGTAATAATATAAACTCTTATCGACCTGGCAACTTCAATCCAAATGTTTCTTCAAGTGGACCTGCTCCAAATTTTATTCGTGGCAATACTGAACAGTTATGGAACAATAGCAATAATATACAGGGAAATCATCAAAATCCTTATTCACAGCCTCCTTTAAGACCAAACAGTTTCCCGCTGCAACCTCCTTTTGCATCGAATAATTCTTACCCTCCAAGTACCCATACTTTTGCAAATTCACCATTGCCACCGAGGACTGGTGTCCCCAGCTTCACTGCAGTTCCACCACCAAATGTGCCTGAAATTGGCAATCTGAACATTTCTGGATATCCCAATGGTGTTCATAATCCACGTCCTGTTAAGCAACGCAGTGGGGAATTGAAGCAGAATCCTAACAATAATGCTCCACTTCCGGTAACATCAACTGTTGAACAAAATGGACATATGGTACTTAGCAATAGCACGCAACATTTACAAGGCTATTCAAATGGAAATGGTCCAGACCATCAACTTGCATCATCGACGGGTAATAATAACCATTCTGGTAATGGCATGTGGGGATCTCCAGGTTGCCCTAAACCGTCTGAATATGTCCAAGGCCTTATAGGGGTTGTTTTACTAGCCTTGAATTCACTAAAAAATGAGAAGATTATGCCAACAGAGGCAAATATAACTGATTGCATTCGATATGGAGATCCCAGGCACCGCAACACTGATGTTAAGAAAGCTTTGGAGAGTGCTATTGAGCAGCAGATGGTGGTGAAACAGAATTTAGGTGCTTTGCAGCTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGCATAAATCCTATAGCTGGTAATCCTAAGCAGCACTCAAAAGAAACCTGGGATGAAGTTCAAAAGTTTCTGACAACTTCTTCAGGAAGATCAGCATTGATGGGTACTCAGTGCAAGTATGAAGCAGGTATAGTCATAAAGAATTTGTGCTTTAAGGAACTTTCTTTGGGTGATGTGCTTCAAATATTAAACATGTTGATTACTCATAAAAAATGGATTGTGCATCCTCAGTCTGGCTGGCAACCACTTAATATTACTCTTCCTGAGACTAGCCCCAATTCAGGGGCTGTAGCAAGCATATAA | 1884 | 0.449 | MGGGGPNAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSVSAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQLGNNSLVTSSDTLTIPVTSVAQTQPQADSYTEVHVGNQKFPNGGGRGYDPRYQGKTNWRNSGQTNGPKAMNPPPVGHQDSRNNINSYRPGNFNPNVSSSGPAPNFIRGNTEQLWNNSNNIQGNHQNPYSQPPLRPNSFPLQPPFASNNSYPPSTHTFANSPLPPRTGVPSFTAVPPPNVPEIGNLNISGYPNGVHNPRPVKQRSGELKQNPNNNAPLPVTSTVEQNGHMVLSNSTQHLQGYSNGNGPDHQLASSTGNNNHSGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNEKIMPTEANITDCIRYGDPRHRNTDVKKALESAIEQQMVVKQNLGALQLYVGKNDKLWKCINPIAGNPKQHSKETWDEVQKFLTTSSGRSALMGTQCKYEAGIVIKNLCFKELSLGDVLQILNMLITHKKWIVHPQSGWQPLNITLPETSPNSGAVASI | 627 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip06g00839 | 627 | CDD | PIN_limkain_b1_N_like | 16 | 140 | - | - | |
Aip06g00839 | 627 | Gene3D | - | 7 | 159 | - | - | |
Aip06g00839 | 627 | MobiDBLite | consensus disorder prediction | 410 | 439 | - | - | |
Aip06g00839 | 627 | MobiDBLite | consensus disorder prediction | 410 | 444 | - | - | |
Aip06g00839 | 627 | MobiDBLite | consensus disorder prediction | 314 | 340 | - | - | |
Aip06g00839 | 627 | Pfam | NYN domain | 16 | 152 | IPR021139 | GO:0004540 | |
Aip06g00839 | 627 | PANTHER | ACID BINDING PROTEIN, PUTATIVE-RELATED | 2 | 611 | - | - | |
Aip06g00839 | 627 | MobiDBLite | consensus disorder prediction | 209 | 342 | - | - | |
Aip06g00839 | 627 | MobiDBLite | consensus disorder prediction | 250 | 305 | - | - | |
Aip06g00839 | 627 | MobiDBLite | consensus disorder prediction | 228 | 242 | - | - | |
Aip06g00839 | 627 | MobiDBLite | consensus disorder prediction | 363 | 394 | - | - | |
Aip06g00839 | 627 | PANTHER | LIMKAIN B LKAP | 2 | 611 | IPR024768 | GO:0005777|GO:0010468|GO:1903231 | |
Aip06g00839 | 627 | MobiDBLite | consensus disorder prediction | 377 | 394 | - | - | |
Aip06g00839 | 627 | Pfam | OST-HTH Associated domain | 564 | 613 | IPR025677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip06g00839 | Aip-Chr6 | 11316401 | 11320369 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip06g00839 | 8 | 199 | C2H2 Transcription Factor Family | AT5G61190 | 71.282 | 5.23e-86 | 288 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip06g00839 | - | - | gmx:100794608 | 1036.94 |