Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00826 ATGATGCCTCTGCATGAGTTGTACCGCAAGGCCAAGGAGAAGCTTGATTGTTCTAAAGAGATCAATAGCACAAGTGCACCTGATCATTCAACCGCACCAGAGAGTGATTTCTATGAACTTGTTTGGGAAAATGGTCAGATTTCAATGCAGGGTCAGTCAAGTAGTAGAGGTAGAAAGATTCCAACTTGTAAGAGTTTAACATCTCATTGTCCCAAGGGTCTTCAACATAGGGATGTAGTGGGATATGGTAATGGTACAAATAATGTTAATATGATGAGGATGGGGAAGTTTGGGGATTCAGAAAGTGGACTCAATGAGATTAGAATGCCGGCTCCATCTGCTGAAGACGAAGACGTGATACATTGGTTGAATTATGGAATGGATGAATCTTTGCCACATGACTATGGTTCTGATTTCATACATGAACTCTCTGGGGTCACCATGCATGAAATCCCTCCCTTAAATAACCTCTCTTTGTTGGACAAAAGAAGCAATTCCAATCAGGTACTTAGGGACTCTCACAAGAACTATGCGCGCCATGCTTTTGGTTCAGAACAAGGGATCCTTAACAAGGACTTTTCGGTTATGGCTAGAGGAGAGATTGAGATCCCTGGACCCAAACCTAGCACAAGTCAATTTTGCCAACCATCATCATATCAATGTCAAGGATCATTTGCATCTGTTAGGTCCAAAGCATCAGAAATAACCGAGAATAATGGTAGTAACCCTGCTCATCAAGTACCTTGTGGGGAACTGACTCAGATTTTCCCATCTGCTTCAAGTGGTTTTTCTGGGTTAAAGTTGGATAAGCAAGATCAGGTTATGTGCAGCAGTAGTTCCACTATAATGAACTTCTCCCATTTTGCTAGACCTGCTGCTATTGTGAAAGCTAATCTTCAGAACATTGGGTTGTCTTCATCAAGATCAGATGGTATTGAAAACAAAAAGAAAGATGCTTCTGCGACCGCAAGCAATCCTCCTGAATCAACAAAAGCTGGTTTTAGTGGCGAACGTCAGAAACAATCCGCTGTGCATGAGCTGAAGGTTGTAGAGCCTTCTAAGGCTGATTTGAAGCAATTGGAGCCCTCTAAGGCTGATTTGAAGCAATTGGAGCCAAAATCTCTTGAAGTGAATGCCACTGTTTTGAGGCAATCTGATCCTGCTCGAAAAGAAGACGTGTCAAAGATTTATCAAAGTTCCAATCTACTTCTTTGTGAAAGTACCAATAAAGGAGAGGAAGCTGTTGTAAAAAATATGGAGCCTGCAGTAGCCTCTTCATCCGTTTGCTCTGGCAATGGCGCAGAGAGAATTTCGGGCAACCCAAACCAAAGTTTGAAGCGAAAAAGACAAGAAACTGAGGACTCTGAGTGCCACAGTGAAGATGTTGAGGAAGAATCAGTGGATGTTAAAAAGGCAGGTCCAACACGAGGTGTTAAGAGAAGTCGTTCAGCCGAAGTACATAATCTATCTGAAAGGGTGAGTGAAGACCATATGCCAATTGTAGGCGAAGAGACAGGATCAATGAGAAGATGCGTGCATTGCAAGATCTCATACCAAACTGCAATAAGGTGGACAAAGCTTCAATGCTGGATGAGGCAATCGAGTATCTCAAAACACTTCAACTCCAAGTTCAAATTATGTCAATGGGAGCTGATGGGGTTGGGAATGGGTTATGGAATGGGTATGCCTGACATGAATGGTGGACCTTCTAGATTCCCAATGGTTCAGGTGCCCCAAATGCACAGAACTCATCCTCCGGCTGCACCTATGCCTGGACCCTCTGCATTACATGGGATGGGAAGATCAAATCCTCCAGTGTTTGGCCTGCCTAGCCAGGGACTTCCAATTCCAACTATGCCGCGTGCTCCAATGTTTTCTTATCAGGGAGAGCCTGTTGCAAACTCACCAGCCTTACGACCAAATGCTTGTGGAACAGCAGGACTTACGGAAACTGAGAATCCAGCTTCAGCATCTAACCAAAAGGATCCAGTGCCAATTATGCAGAACACCAATGGTTGTAACTCGACGAGTCAGACTACGAAACAGTGTGAAGCAGCAGCAGCCGGCAGAGCTGTGGATGCCACGAAAAAAGATAACCTTGTGACTGATAAATTCGACTAG 2121 0.4399 MMPLHELYRKAKEKLDCSKEINSTSAPDHSTAPESDFYELVWENGQISMQGQSSSRGRKIPTCKSLTSHCPKGLQHRDVVGYGNGTNNVNMMRMGKFGDSESGLNEIRMPAPSAEDEDVIHWLNYGMDESLPHDYGSDFIHELSGVTMHEIPPLNNLSLLDKRSNSNQVLRDSHKNYARHAFGSEQGILNKDFSVMARGEIEIPGPKPSTSQFCQPSSYQCQGSFASVRSKASEITENNGSNPAHQVPCGELTQIFPSASSGFSGLKLDKQDQVMCSSSSTIMNFSHFARPAAIVKANLQNIGLSSSRSDGIENKKKDASATASNPPESTKAGFSGERQKQSAVHELKVVEPSKADLKQLEPSKADLKQLEPKSLEVNATVLRQSDPARKEDVSKIYQSSNLLLCESTNKGEEAVVKNMEPAVASSSVCSGNGAERISGNPNQSLKRKRQETEDSECHSEDVEEESVDVKKAGPTRGVKRSRSAEVHNLSERVSEDHMPIVGEETGSMRRCVHCKISYQTAIRWTKLQCWMRQSSISKHFNSKFKLCQWELMGLGMGYGMGMPDMNGGPSRFPMVQVPQMHRTHPPAAPMPGPSALHGMGRSNPPVFGLPSQGLPIPTMPRAPMFSYQGEPVANSPALRPNACGTAGLTETENPASASNQKDPVPIMQNTNGCNSTSQTTKQCEAAAAGRAVDATKKDNLVTDKFD 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00826 706 Coils Coil 445 465 - -
Aip06g00826 706 MobiDBLite consensus disorder prediction 318 337 - -
Aip06g00826 706 PANTHER TRANSCRIPTION FACTOR PIF3 552 679 IPR044273 GO:0003700|GO:0006355
Aip06g00826 706 PANTHER TRANSCRIPTION FACTOR PIF3 2 492 IPR044273 GO:0003700|GO:0006355
Aip06g00826 706 PANTHER TRANSCRIPTION FACTOR PIF3 552 679 - -
Aip06g00826 706 PANTHER TRANSCRIPTION FACTOR PIF3 2 492 - -
Aip06g00826 706 MobiDBLite consensus disorder prediction 425 445 - -
Aip06g00826 706 MobiDBLite consensus disorder prediction 639 677 - -
Aip06g00826 706 MobiDBLite consensus disorder prediction 425 492 - -
Aip06g00826 706 MobiDBLite consensus disorder prediction 463 492 - -
Aip06g00826 706 MobiDBLite consensus disorder prediction 687 706 - -
Aip06g00826 706 MobiDBLite consensus disorder prediction 646 677 - -
Aip06g00826 706 MobiDBLite consensus disorder prediction 305 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00826 Aip-Chr6 11169495 11173872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00826 2 591 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 27.548 4.00e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00826 K12126 - gmx:100794974 541.576