Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00824 ATGGGGAAACTTTTCTGGCTTGCCATTGCGATTGCGATAGGACTTGTTTTAAGCAACTGGGTTCATGGCTTTCAAGGATATGAATATCACCACTTGAATGAAACAGAACCCTCATTGCTGGAGGCTCATGAATCATCTTTGTTTCAGAGCAATACTCTCTTCGTGGGACTCACCCTTATTCATACTGCAGCTGCCAAAGGAGCAGTGTGCTTGGATGGATCTTTACCTGCTTATCATTTGCATCGGGGTTATGGATCAGGAGCAAACAGCTGGCTTATTAATTTAGAGGGAGGTGGATGGTGTAACAGCATTAGAACATGTGTTTATCGCAAGAGAACACGGCGTGGATCATCCACATTTATGGAAAAGGAGATTCCTTTTACGGGAATACTGAGCAACAAAGCTGAAGAAAACCCAGATTTTTTCAATTGGAACAGAGTAAAGATTCGTTATTGTGATGGAGCATCATTTACCGGTGATAGTGAAGACAAGACAGCAGACCTACAATTCAGAGGACAGAGGATTTGGGCAGCCGCAATAGAAGATTTGATGTCCCAGGGAATGCGCTTTGCCGAGCAGGCTCTTCTCTCCGGATGCTCTGCTGGTGGCTTGGCTACTATCATACACTGCGACGAATTTCGCAACCTCTTTCCTAGGACCACCAGAGTGAAGTGTCTTAGTGATGCCGGATTGTTTCTTGATGCAATTGATATATCTGGTGGCCATACCCTCAGAAATTTCTACACCGGTGTCGTAGGATTGCAGGGAGCACAGAAGAATTTGCCCGAGATATGTACTAATCATCTTGACCCCACATCGTGCTTCTTCCCCCAGAACTTGATTGCGAGTGTTAGAACCCCGCTATTCATTCTCAATGCTGCTTATGATTCATGGCAGATCCAATCGAGTATAGCGCCTCCATCAGCAGATCCACATGGATATTGGCATGATTGCAGATTAAACTATGCTAAATGTACTACATCACAGATCCAATTTCTTCAAGGATTCAGGATTCACATGCTGAACATTATAAAAGAGTTCTCAAGATCATACAAGAATGGATTGTTCATCAATTCATGTTTCTCTCACTGCCAATCTGAGAGGCAGGACACATGGTTCGCTGAAAATTCTCCAATCGTGAAGAACAAGGTAATTGCTGTGGCTGTTGGAGATTGGTATTTCGACCGCGCAGGTGTGAAGGTGATTGATTGTCCTTACCCTTGTGATAATACCTGTCACCATCTCGTATTCAGATCATGA 1260 0.4397 MGKLFWLAIAIAIGLVLSNWVHGFQGYEYHHLNETEPSLLEAHESSLFQSNTLFVGLTLIHTAAAKGAVCLDGSLPAYHLHRGYGSGANSWLINLEGGGWCNSIRTCVYRKRTRRGSSTFMEKEIPFTGILSNKAEENPDFFNWNRVKIRYCDGASFTGDSEDKTADLQFRGQRIWAAAIEDLMSQGMRFAEQALLSGCSAGGLATIIHCDEFRNLFPRTTRVKCLSDAGLFLDAIDISGGHTLRNFYTGVVGLQGAQKNLPEICTNHLDPTSCFFPQNLIASVRTPLFILNAAYDSWQIQSSIAPPSADPHGYWHDCRLNYAKCTTSQIQFLQGFRIHMLNIIKEFSRSYKNGLFINSCFSHCQSERQDTWFAENSPIVKNKVIAVAVGDWYFDRAGVKVIDCPYPCDNTCHHLVFRS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00824 419 Pfam Pectinacetylesterase 49 397 IPR004963 GO:0016787
Aip06g00824 419 PANTHER NOTUM-RELATED 5 417 IPR004963 GO:0016787
Aip06g00824 419 PANTHER PECTIN ACETYLESTERASE 5 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00824 Aip-Chr6 11122126 11125697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00824 1 418 Carbohydrate Esterase AT1G57590 67.542 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00824 K19882 - gmx:100782401 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00824 06 11122126 11125697 Aip06g00797 06 10603464 10608080 ECH
Aip06g00824 06 11122126 11125697 Aip09g01418 09 25146522 25150759 ECH
Aip06g00824 06 11122126 11125697 Aip06g00824 06 11122126 11125697 ECH
Aip06g00824 06 11122126 11125697 Aip09g01452 09 26270168 26274923 PCT