Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00797 ATGAGAATGAATGTGTTTGTGATAGCCGCACTTGCTTTTGTGTCTCTAGTTTCCGTCATTGATGGATCTGAGCATCAGCCTCAGCTATCTGAGTTTGTAAACGATGCTTTATTCTCATCAGTTTCAAGCAAGCAGCCTTCCCAGCCACAACCTCTCATGGTTCCCATTACTGTTATCAATGGAGCTGCTGCCAAAGGAGCTGTATGTTTGGATGGAACATCGCCTGCCTATCACTTTCATCCTGGATCCGGATCAGGAGCCAATAGTTGGCTCATTCACTTAGAGGGAGGAGGATGGTGTAATACCATCAGAAATTGTGTTTTTAGGAAGACGACTCGGCGTGGTTCCTTTAAATTCATGGAAAAGACACTGCCATTCACTGGGATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAATACGTTACTGTGATGGAGCATCTTTCGCCGGAGACAGTCAAAATGAGGCTAATCAGCTTCAATTTCGAGGACAGAAAATATGGCTAGCTGCAATCGAGGAATTAATGTCCAAAGGAATGCAAAAAGCCAACCAGGCACTTTTGTCTGGATGCTCTGCAGGTGGTCTGGCATCTATAATACATTGTGATGAATTCGGAAGCATGTTTCCAAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGATTTTTTCTTGATGCAGTTGATGTGTCTGGGGGGCACACACTGAGGAATATGTTTGGAGGTGTAGTTACATTACAGGAAGTACAAAAAAACTTACCAAAAAGTTGTCTCAACCAACTGGATCCAACTTCGTGCTTCTTTCCTCAAAACTTGATCCAGCATGTTCAAACTCCATTGTTTCTTCTCAATGCAGCTTATGATGCATGGCAGGTGCAAGAAAGTCTAGCCCCCCATTCAGCGGATCCAAGTGGTTCTTGGAATGATTGTAAAGCAAATCATGCAAGGTGTAACTCATCTCAAATACAGTTCTTCCAAGACTTTAGAAATCAAATGCTAAATGATGTGAAAGACTTCTCAAGGTCCTCTCCAACTGGATTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCGCTTATCAACGACATGCCTGTGGCGATTGCTGTTGGAGACTGGTTTTTTGATCGAAAAACTATCAAAGCTATTGATTGTGCTTATCCCTGTGACACAACCTGCCATAATCTGGTCTTCAATGTTGCTAGATCTACCGTGGTTGACTCCCAGTATATAAGTGAAAGTGATGACACATCCACCACCACCACCATGATATATTCCTCTCAGTCCTCCAGGTTGACTTTTCCTGCTCTATACCTACTAAGTGCTTTGTTTCCCACTTCCATGTTCCTACTGCACCTTAGAGTAGAAGTACTATCAAGATTCTTTAGCCATTCCACATAA 1455 0.422 MRMNVFVIAALAFVSLVSVIDGSEHQPQLSEFVNDALFSSVSSKQPSQPQPLMVPITVINGAAAKGAVCLDGTSPAYHFHPGSGSGANSWLIHLEGGGWCNTIRNCVFRKTTRRGSFKFMEKTLPFTGILSNKPEENPDFFNWNRVKIRYCDGASFAGDSQNEANQLQFRGQKIWLAAIEELMSKGMQKANQALLSGCSAGGLASIIHCDEFGSMFPKSTKVKCLSDAGFFLDAVDVSGGHTLRNMFGGVVTLQEVQKNLPKSCLNQLDPTSCFFPQNLIQHVQTPLFLLNAAYDAWQVQESLAPHSADPSGSWNDCKANHARCNSSQIQFFQDFRNQMLNDVKDFSRSSPTGLFINSCFAHCQSERQDTWFADDSPLINDMPVAIAVGDWFFDRKTIKAIDCAYPCDTTCHNLVFNVARSTVVDSQYISESDDTSTTTTMIYSSQSSRLTFPALYLLSALFPTSMFLLHLRVEVLSRFFSHST 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00797 484 Pfam Pectinacetylesterase 48 397 IPR004963 GO:0016787
Aip06g00797 484 PANTHER PECTIN ACETYLESTERASE 4 433 - -
Aip06g00797 484 PANTHER NOTUM-RELATED 4 433 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00797 Aip-Chr6 10603464 10608080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00797 47 417 Carbohydrate Esterase AT2G46930 72.237 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00797 K19882 - gmx:100785270 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00797 06 10603464 10608080 Aip09g01418 09 25146522 25150759 ECH
Aip06g00824 06 11122126 11125697 Aip06g00797 06 10603464 10608080 ECH
Aip09g01418 09 25146522 25150759 Aip06g00797 06 10603464 10608080 ECH
Aip01g02387 01 123168703 123174184 Aip06g00797 06 10603464 10608080 ECH
Aip06g00797 06 10603464 10608080 Aip06g00797 06 10603464 10608080 ECH
Aip06g00797 06 10603464 10608080 Aip09g01418 09 25146522 25150759 PCT