Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00785 ATGGATAACCCACACCCCCGTGAATTGACTTTCTTACCCTCTAGGGACGTCAAAGAAGTGGATTTCTTCTCATCATCATCATCAACTGCTGCCGATCATCATCGTCATGGCACCACCACCAACAACGCTTCATCCTTCCCTCATCACCCTGTAAACACTGGGCTGAACTTAACGTGTGCAACTACTGGAATTTCAACTTCAAAGGGATCACCTAATGCCGAAAATACTGAATCCGAGAGGAAAATGGTGGAAGGTGAATTACGGAGACTGCAAGAAGAGAATAGAAAGCTGAGAAGTATGGTGGATCAGATCGCCAAAAGCTATAGCCAACTGCAGGCACAGCTCTTCATGGCTTTGCAGAAACAAAAGCTTACTCATCATCAGAATACTGGTGTCAAGAGCAATGGGATGATAAGTGGAGAAAAAGCTGTGGAGGGAGATGGAAGGGCGAAAGTAGAGATGAAGAATAACGATGCTTCGGTGTCTGGTGATGAAAAGAGAGAAAGAGAGGTATCAGCATCAAACAATAATGGTAATAATGCAGAGGAAGTAATGTCAAAGAAGCATGATGAGAATGATGATCATAATGAAGATGATGAAGATCGTTTGACTAAGCTTCATTTGGGAAAGCAAGTAGCAGCATCTGCTACAGAAGAAGACGTCCTTGAGCGATCTTCTTCTCAGAGTTGGGGATCATGCAAGACTCCCAACTTAGAAGAAACCAAGCTTCCTTCTTCTGACCTTCCTTTCAGGAAAGCCAGGGTTTCAGTGCGCGCAAGATCAGAAGCTCCTCTGATTAGCGATGGATGCCAGTGGAGGAAATACGGACAAAAAATGGCTAAAGGTAACCCCAGTCCTCGAGCCTACTATCGGTGCACCATGGCTGCTGGATGCCCAGTTCGGAAGCAGGTTCAAAGATGCGCAGAGGACAGTACAGTCCTAATAACAACCTATGAAGCTTCCGCGCCATTTCCCACCATCACTCTCGACCTCACACACAACCACCACAACGCACTCCAACTCCACCGTGTGGTCCCTCCTCCCGGTGTTACCTTCCCTCTCCCATTGCATGCAGTTACTCCTCCACATCAGCTTATAGCAGGGCACCCTTTCTTAATCTCTCACCACCAGAAGCTGATGCCTCCTTTGGTTCATCGACAACAACCACAGCCTTCCAATAATTCCCCGTCTATGGTGGAGACAGTGAGTGCAGCCATTGCTTCGGATCCAAACTTCACTGCGGCCGTGGCTGCGGCACTCTCATCAATCATTGGAAGCAGTAACAATGGTGGAAGTGCAAGTACCGTTATTCACCCTAATGCTATTTCTGTTTCACCGAATGGATCACCGCAACTTCCTCAGTCATGTACTACATACTCTACCAACTAG 1389 0.4708 MDNPHPRELTFLPSRDVKEVDFFSSSSSTAADHHRHGTTTNNASSFPHHPVNTGLNLTCATTGISTSKGSPNAENTESERKMVEGELRRLQEENRKLRSMVDQIAKSYSQLQAQLFMALQKQKLTHHQNTGVKSNGMISGEKAVEGDGRAKVEMKNNDASVSGDEKREREVSASNNNGNNAEEVMSKKHDENDDHNEDDEDRLTKLHLGKQVAASATEEDVLERSSSQSWGSCKTPNLEETKLPSSDLPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPSPRAYYRCTMAAGCPVRKQVQRCAEDSTVLITTYEASAPFPTITLDLTHNHHNALQLHRVVPPPGVTFPLPLHAVTPPHQLIAGHPFLISHHQKLMPPLVHRQQPQPSNNSPSMVETVSAAIASDPNFTAAVAAALSSIIGSSNNGGSASTVIHPNAISVSPNGSPQLPQSCTTYSTN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00785 462 MobiDBLite consensus disorder prediction 145 245 - -
Aip06g00785 462 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 320 461 IPR044810 GO:0003700
Aip06g00785 462 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 14 321 IPR044810 GO:0003700
Aip06g00785 462 Pfam WRKY DNA -binding domain 268 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00785 462 MobiDBLite consensus disorder prediction 443 462 - -
Aip06g00785 462 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00785 462 MobiDBLite consensus disorder prediction 145 172 - -
Aip06g00785 462 MobiDBLite consensus disorder prediction 183 207 - -
Aip06g00785 462 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 320 461 - -
Aip06g00785 462 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 14 321 - -
Aip06g00785 462 MobiDBLite consensus disorder prediction 220 242 - -
Aip06g00785 462 MobiDBLite consensus disorder prediction 27 73 - -
Aip06g00785 462 SMART WRKY_cls 266 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00785 462 Coils Coil 73 107 - -
Aip06g00785 462 MobiDBLite consensus disorder prediction 27 81 - -
Aip06g00785 462 Gene3D WRKY domain 253 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g00785 462 SUPERFAMILY WRKY DNA-binding domain 259 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00785 Aip-Chr6 10386299 10389145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00785 19 428 WRKY Transcription Factor Family AT1G62300 33.537 9.73e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip06g00785 WRKY 5.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00785 - - gmx:100783661 342.043