Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00774 ATGTATGAGGAAGCAAGCCAGGTTGCTCATGATGCAGTTGGAAGTATAAGGACAGTAGCATCTTTCTGTGCTGAAGAAACAGTTATGAAGCTATACAGAAAGAAATATGAAGGTCCAATGGAAAAAGGAAAAAGAAAAGGGTTGATCAGTGGAATAGGATTTGGGGTTTCATTTTTCTTTCTCTACTGTGCCTATGCAACCTGTTTCTATGCTGGAGCTAGATTTGTGAAGGATGGCAAGACATCATTCTCAGATGTTTTAAGGGTTTTCTTTGCTTTAACTATGGCAGCTACGGGAATTTCCCAGTCAGGATTCAGTTGCTCCTGA 327 0.4037 MYEEASQVAHDAVGSIRTVASFCAEETVMKLYRKKYEGPMEKGKRKGLISGIGFGVSFFFLYCAYATCFYAGARFVKDGKTSFSDVLRVFFALTMAATGISQSGFSCS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00774 108 Gene3D ABC transporter type 1, transmembrane domain 2 103 IPR036640 GO:0005524|GO:0016021
Aip06g00774 108 SUPERFAMILY ABC transporter transmembrane region 2 104 IPR036640 GO:0005524|GO:0016021
Aip06g00774 108 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 108 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g00774 108 Pfam ABC transporter transmembrane region 2 96 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g00774 108 PANTHER - 1 104 - -
Aip06g00774 108 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00774 Aip-Chr6 10279357 10279782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00774 4 106 Calmodulin-binding Proteins AT2G36910 25.243 1.52e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00774 K05658 - fve:101311221 162.54