Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00759 ATGGAAGCTAGATTTGGTACTGAAGCTCTTCAATTCTATGCTATGGGTGGGTCCTCAGTGGGGAAGAGGTCCATGGAGTGGGATTTGAATGATTGGAAATGGGATGGTGATCTATTCATAGCTAGGCCTTTGAATCCTGGGCCTGAACACAGGCAATTCTTCCCTGCTGGTACCAGGATCCCTGTGGCCGGGGGTCCTTCCAACTCTAATAGCTCATCCTCGTGTTCTGATGAGGTAGATCTCGGGATTCGTGGAGGGAACAAGGAAGGGGATAAGAAGAGGAGGGTTGTTGTCCTGGAGGATGATGCTTTGAATGAGGAATCTGGTACTCTTAGCTTAAAGCTCGGTGGTGGTGTTGGCGGGCATGGTGGTGCCCAAATTGGTAGCTGGGAAGGAGTGAACGGGAAGAAGAGCAGAGTAGCTGGAGGCAATTCGAATCGGGCTGTTTGCCAAGTGGAGGATTGTGGTGCAGATCTCAGCAGTGCTAAAGATTATCACAGGCGCCATAAAGTTTGTGAGATGCACTCCAAGGCCACTAAGGCACTTGTGGGAAATGCAATGCAACGATTCTGCCAACAATGTAGTAGGCAATTTGATGAAGGAAAGAGAAGCTGTCGAAGACGTTTGGCAGGCCACAATAAGCGGAGGAGGAAAACAAACAACGATGCTGTTCCTAATGCAACTTCACTAAATGATGATCAGACAAGTAGTTACCTGCTGATAAGTTTATTGAAGATACTTTCAAACATGCATTCTGACAGGTCAGATCAGACCACCGATCAGGATCTGCTGACTCACTTGCTTAGGAGTCTTGCTAGTCAAAATGGTGATCAAGGGGGTAAGAACTTGTCAAACCTTTTGGCTCAACCAGAGAATTTGTTGAAAGAAGGGAGCTCATCTGGGAAGTCTGAGATGGTTTCTACTTTATTCTCAAATGGATCTCAAGGCTCTCCATCTGTAATACAACAGCATCAAGCAATTTCTGTAGCTGAGCTCCAACATCAGGTGATGCATGCACATGATATTATGCCTACTGATCAACAAATCATGTCTTCTACAAAGCCCAGCGCTTCAAATAGTCCTCCAACTTACTCAGAAGCCCGAGACAGTACTGCTGGACAGACAAAGATAAACAATTTTGATTTGAATGACATATATATCGACTCAGATGATGGCGTAGAAGATATTGAAAAGCTGCCTGTCTCTGCAAATCTCGGTACTAGCTCTCTTGAATACCCATGGACACAACATGACTCTCATCAGTCAAGTCCACCTCAAACAAGTGGCAACTCAGATTCTGCATCTGCTCAGTCCCCTAGTAGTTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTTAAACTCTTTGGCAAAGAACCAAATGATTTCCCTCTTGTACTTAGAGCACAGATTCTTGACTGGTTATCCCACAGTCCAACTGACATGGAAAGCTACATCCGGCCTGGTTGTATTGTTCTGACCATTTATCTGCGCCAGTCTGAAGCTATGTGGGAGGAACTTTGCTATGATTTGACTTCCAGCTTGAGTAGGCTTCTGGATGTCTCAGATGTTGATTTTTGGAGGACTGGATGGGTTCATATCCGGGTGCAGCATCAGCTAGCATTTGTTTTCAATGGTCAGGTTGTCATAGATACATCCTTACCTTTCAAAAGCAACAATTACGGCAAGATTCTTAGTGTTAGTCCAATTGCTGTACCAGCATCAAAAACAGCTCATTTTTCTGTCAAGGGTATCAACCTGAATCGCCCGGCCACAAGGTTATTGTGTGCTTTAGAAGGGAATTATCTATCTTGTGAAGATGCTCATGAGTCGATGGATCAAGGCTCCAAGGAGCTTGAAGAGCTTCAATGTATCCAATTTTCATGTTCTGTCCCCGTGATAAATGGAAGAGGATTTATTGAGATTGAGGATCAGGGTCTGAGCAGCAGCTATTTTCCTTTCATTGTTGCTGAGGAGGACGTTTGCTCTGAAATCTGTGTGCTTGAGCCCTTAATAGAAGTAAGTGATATTGATCCCGATAATGAAGGGACTGGAAAAATTAAAGCCAAAAACCAAGCCATGGATTTCATTCATGAAATGGGTTGGCTTCTTCACAGAAGCCAATTGAGATCACGGATGGTTCACTTGAACTCTAGTGTAGAACTCTTTCCACTAAAACGATTCAAGTGGCTCATGGAGTTCTCTGTGGACCGTGATTGGTGTGCTGTAGTGAAAAAACTACTGAACCTACTGCTTAGTGGAACAGTGGGCACAGGAGATCACCAATCACTTCATCTCGCACTTTCAGAGATGGGTCTCCTTCATAAAGCTGTAAGGAGAAATAGCAGGCAATTGGTGGAGCTACTTTTGAGATATGTTCCCGAGAATATTTCTGACAAACTAGGGCATGAAGACATGGCTCTGGTTGGCGGAGAGAATCAGAGTTTCTTGTTTAGACCCGATGCTGCGGGTCCTGCTGGTTTGACACCACTCCATATAGCAGCTGGGAAAGATGGTTCAGAGGAAGTACTGGATGCATTAACCAACGATCCTTGCATGGTGGGAATTGAAGCATGGAAGAGCGCTCGTGATAGCACAGGCTCGACCCCCGAGGATTATGCACGTTTACGAGGCCATTATGCTTACATTCACCTGGTGCAGAAGAAAATCAACAAGAGGCAAGGAGGGGCTCATGTTGTGGTTGACATTCCAAGCAATCTGACTGGGTTCAATACAAACCAGAAGCAAAATGAGACGACCAGCTTCGACATTGTTGGAAAGGCTGAAGGAAGAAGTGCCCAAAAGCAGTGCAAACTATGTGATAATAAGTTGTCTTGTAGAGCTGTAGTAGGCAAGTCTCTGGCATACAGACCTGCTATGCTGTCGATGGTGGCTATAGCAGCAGTGTGTGTCTGTGTCGCGCTTCTGTTTAAGAGCTCGCCGGAAGTTCTGTACGTGTTCCGCCCATTCAGGTGGGAATCGTTGGAGTACGGAACAAGCTGA 3009 0.454 MEARFGTEALQFYAMGGSSVGKRSMEWDLNDWKWDGDLFIARPLNPGPEHRQFFPAGTRIPVAGGPSNSNSSSSCSDEVDLGIRGGNKEGDKKRRVVVLEDDALNEESGTLSLKLGGGVGGHGGAQIGSWEGVNGKKSRVAGGNSNRAVCQVEDCGADLSSAKDYHRRHKVCEMHSKATKALVGNAMQRFCQQCSRQFDEGKRSCRRRLAGHNKRRRKTNNDAVPNATSLNDDQTSSYLLISLLKILSNMHSDRSDQTTDQDLLTHLLRSLASQNGDQGGKNLSNLLAQPENLLKEGSSSGKSEMVSTLFSNGSQGSPSVIQQHQAISVAELQHQVMHAHDIMPTDQQIMSSTKPSASNSPPTYSEARDSTAGQTKINNFDLNDIYIDSDDGVEDIEKLPVSANLGTSSLEYPWTQHDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDMESYIRPGCIVLTIYLRQSEAMWEELCYDLTSSLSRLLDVSDVDFWRTGWVHIRVQHQLAFVFNGQVVIDTSLPFKSNNYGKILSVSPIAVPASKTAHFSVKGINLNRPATRLLCALEGNYLSCEDAHESMDQGSKELEELQCIQFSCSVPVINGRGFIEIEDQGLSSSYFPFIVAEEDVCSEICVLEPLIEVSDIDPDNEGTGKIKAKNQAMDFIHEMGWLLHRSQLRSRMVHLNSSVELFPLKRFKWLMEFSVDRDWCAVVKKLLNLLLSGTVGTGDHQSLHLALSEMGLLHKAVRRNSRQLVELLLRYVPENISDKLGHEDMALVGGENQSFLFRPDAAGPAGLTPLHIAAGKDGSEEVLDALTNDPCMVGIEAWKSARDSTGSTPEDYARLRGHYAYIHLVQKKINKRQGGAHVVVDIPSNLTGFNTNQKQNETTSFDIVGKAEGRSAQKQCKLCDNKLSCRAVVGKSLAYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWESLEYGTS 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00759 1002 ProSiteProfiles Zinc finger SBP-type profile. 147 219 IPR004333 GO:0003677
Aip06g00759 1002 SUPERFAMILY SBT domain 148 223 IPR036893 GO:0003677|GO:0005634
Aip06g00759 1002 Gene3D - 141 206 IPR036893 GO:0003677|GO:0005634
Aip06g00759 1002 MobiDBLite consensus disorder prediction 411 448 - -
Aip06g00759 1002 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 15 1001 IPR044817 GO:0003677
Aip06g00759 1002 Gene3D - 745 897 IPR036770 -
Aip06g00759 1002 Pfam SBP domain 150 218 IPR004333 GO:0003677
Aip06g00759 1002 MobiDBLite consensus disorder prediction 348 372 - -
Aip06g00759 1002 MobiDBLite consensus disorder prediction 295 321 - -
Aip06g00759 1002 SUPERFAMILY Ankyrin repeat 774 886 IPR036770 -
Aip06g00759 1002 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 15 1001 - -
Aip06g00759 1002 MobiDBLite consensus disorder prediction 63 78 - -
Aip06g00759 1002 MobiDBLite consensus disorder prediction 61 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00759 Aip-Chr6 10138596 10144360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00759 1 1002 SBP-box Gene Family AT3G60030 55.230 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aip06g00759 SBP 3.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00759 - - gmx:100814273 1563.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00759 06 10138596 10144360 Aip06g00759 06 10138596 10144360 ECH