Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00756 ATGGAGGATTGTTGTGCCGTTTGCGCCGAGCCCTTGGAATGGGTTGCTTATGGACCTTGCATGCACCGCGATGTCTGCTCCACGTGCGTCTCTCGCCTCCGATTCATATGCCACGATCGCCGTTGCTGCATCTGCAAGACCGAATGCGACACCGTATTCGTTACCAAGGCTCTAGGAGACTATACACGGACGATTAATGATTTTTCATCCTTACCCTCCGACCCAAGGGAGGGTAAGGTTGGATCATATTGGTACCATGAGGATACAAATGCATATTTCGATGATATGGACCATTACAGGATGATCAAGGCTATGTGCAGGCTCTCCTGCAGTGTATGTGACAGGATGGAGGAGCAACCACATGATGCCTCAAAGCGCCGGCAGAGGTTTAGGAATATAGAGCAGCTGAAGGGTCACTTATTCCACCGTCATAAGTTGCTTATGTGTAGCTTATGTTTGGAGGGGAGGAAGGTATTTATATGCGAGCAAAAGCTTTATACCAGAGCACAATTGAATCAGCATATAAGCACAGGTGATTCAGAAGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAGTTCTGTAGAACCCCATTTTATGGGGATAATGAATTATACACACACATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGACAATATGAATACTATAAGAATTATGATGACCTGGAGATCCATTTCCGTAATGAGCACTTCTTATGTGAAGATGAAGCTTGCCTTGCTAAGAAGTTTATTGTGTTTCAATCTGAAGCAGAAATGAAGAGGCATAATGCTATTGAACATGGAGGGCGAATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCGACCAGCTTTCGGTATAAGCGTAATGATCAAGACCAACGCCGTGGAAGAGGCCGCTCCTTTCGTCGTGATTTTTCTGAAAATCAACTTTCTATGGCCATTGAAGCCAGCCTGCAGATGGCTAATGCAGCGGAAACATTTCATGATCCATCATCTTCAAGTAGTGGGCAAGTTGCAGTTGATGATGGTAATGCTGATGTTGATTCTATTATTCAGCCATTTGAATCAGTAGCTACATCGGGATCTGAAGCATCTGCACGATACCTCCAAGCCTTAGGACCTAACTCGAGGAATGCAGCACTAGCAGATTCATCATTCCCTCCACTCCCACTAGCTTCCAGCAATGACCAGCAAAGGTCCAAACAGGAGTTGGAAGGTTCATCCAGTAATACCATGGCAGCACGCTTGCGTCGGCATGGGAACAGAAATGTTTCTGTAATTAATGCTGGTAATGCTTGGCCTGCACCAGGTCGTAATTCTACCCAAGCTAGACTGCAATCAAATGCTGCTCCTGGAGTGCCACGTAATTCTGGTCAGATGAAGACAGCAAATAACATTGGACCTTCACCCTCAACTTATGCTAGTTCTATTCAACCTACACCCAGAACTGCCCTTGCACAATCATCTGTTGGTTCTTCGCGGGATACACGTGATAACGGAAGAATGGTTCACTCTGCATCTGCTCCAAATCTCATTGAGAGCAACCCCATTGAAGCTTCAATTTCCGAGTTTCCTCCTGTTTCTGCTTCACTAGTGAGCAAGTTATCTGCAAGCACTCAGACTCCGTTGAATGTGGAAAATGTTCAGTCTGCTAACAAGTCATTGGTTGAAAAGATTCGTGGAGCTCTTGATTTTGATGAAGATAGATACACTTTGTTTAAAGACATATCTGGTCAATATCGTCAAGGCACACTTGATACGGAGACATATCTGGACTGTGTGCAGCAGTTTGGTTTGTCTCATCTTGTACCCGAAATGGCTAATTTATTGCCTGATCCTCAGAAGAAGGAAGAGCTCATTTTGTCGTACAACAGTAGTTTGCAAAGGAATGCTTTTCCAGAAAATGGATGGGTCCATGGTGGTTCTGGCATACCGTCTAAAGGTAGTAATGCTTCCAAGAAGGGTAAAGGTAAGTCTGTAGATGGTAGTGGTAGTAACTCCACAAATAGATTAGCAGATAGCTTCTTAAGCACAGTACATCAACTACAGTCAAGCTATAAATCTTCAGAAGAGAATTTGGAGGTGCTATCAAGGGGTGATTATCGAACTAACAAGGGCAAGTCAAAAATCAATCAGCAGATTGATACCAATTCGGGAAATCAACCTTTGAGAATCAGTGGGCAGACAGAGGCATCGGGTGGAATTTTATCAAATCAGAAAAAGGAGGATGCTGGTGTTGGCAGTAAACAACGTAAAAAAACTTCCAAATTTCTTAGAGTGCGACTTGGCGATGGTTCTGCTTCAGCCCTTCTTGATTTTGATAACTCTCAGACTGAGCCAGATCCTGGAACAGACCCTTTGCCAGGTAACAAGAATGACTCCGGAGGTCTGCCTGTGCGAGGTGTTTGGCGAAAGGGGGGAGGCCAGAGGCTCTTCAACTGA 2487 0.4475 MEDCCAVCAEPLEWVAYGPCMHRDVCSTCVSRLRFICHDRRCCICKTECDTVFVTKALGDYTRTINDFSSLPSDPREGKVGSYWYHEDTNAYFDDMDHYRMIKAMCRLSCSVCDRMEEQPHDASKRRQRFRNIEQLKGHLFHRHKLLMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRNEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYKRNDQDQRRGRGRSFRRDFSENQLSMAIEASLQMANAAETFHDPSSSSSGQVAVDDGNADVDSIIQPFESVATSGSEASARYLQALGPNSRNAALADSSFPPLPLASSNDQQRSKQELEGSSSNTMAARLRRHGNRNVSVINAGNAWPAPGRNSTQARLQSNAAPGVPRNSGQMKTANNIGPSPSTYASSIQPTPRTALAQSSVGSSRDTRDNGRMVHSASAPNLIESNPIEASISEFPPVSASLVSKLSASTQTPLNVENVQSANKSLVEKIRGALDFDEDRYTLFKDISGQYRQGTLDTETYLDCVQQFGLSHLVPEMANLLPDPQKKEELILSYNSSLQRNAFPENGWVHGGSGIPSKGSNASKKGKGKSVDGSGSNSTNRLADSFLSTVHQLQSSYKSSEENLEVLSRGDYRTNKGKSKINQQIDTNSGNQPLRISGQTEASGGILSNQKKEDAGVGSKQRKKTSKFLRVRLGDGSASALLDFDNSQTEPDPGTDPLPGNKNDSGGLPVRGVWRKGGGQRLFN 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00756 828 MobiDBLite consensus disorder prediction 783 828 - -
Aip06g00756 828 MobiDBLite consensus disorder prediction 394 425 - -
Aip06g00756 828 MobiDBLite consensus disorder prediction 649 682 - -
Aip06g00756 828 MobiDBLite consensus disorder prediction 712 768 - -
Aip06g00756 828 PANTHER EBR1 1 827 - -
Aip06g00756 828 SMART c2h2final6 220 250 IPR013087 -
Aip06g00756 828 SMART c2h2final6 251 280 IPR013087 -
Aip06g00756 828 SMART c2h2final6 108 144 IPR013087 -
Aip06g00756 828 SMART c2h2final6 196 219 IPR013087 -
Aip06g00756 828 CDD RING-HC_ZNF598 5 46 IPR041888 -
Aip06g00756 828 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Aip06g00756 828 MobiDBLite consensus disorder prediction 721 751 - -
Aip06g00756 828 MobiDBLite consensus disorder prediction 444 517 - -
Aip06g00756 828 MobiDBLite consensus disorder prediction 444 511 - -
Aip06g00756 828 PANTHER ZINC FINGER PROTEIN 598 1 827 IPR044288 GO:0061630|GO:0072344
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00756 1 823 C2H2 Transcription Factor Family AT3G62240 53.326 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00756 K22381 - gmx:100799878 1249.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00756 06 10104201 10108615 Aip06g00756 06 10104201 10108615 ECH