Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00717 ATGGAGAAGAAGGAGATAATGATGAGTGTGAAGATGGAAGATGCATCATCGCTATTCAGTTCTTGTTACAGCAACAGCAATAACATTCCATTATGGAGCGTGTTTGATTTGTGTCAAGAAACAGAGGAGAAGGGTTCTTTAGGGTTTATGGATCTACTTGGTGTGCATCAAGACTACTACAACGGTGGTGGTGGTGGTGGTGCTCCTCTGCTTGCTGATAATAATTCTCCATCTCAGCAACCTACTCCTACTACTCCAAAGTCAGCTTCACCTCTTTCATCATCTGTGTCCACCACTACTACTGTGGACCAAGCTGCACCGTCATCTCAACACGCCGACAAACTGTTGAAGGCGAAGAAGACAAATGGGAAGAAAAGAGAGAGGGAAGCTCGATACGCGTTCATGACAAAAAGCGAGGTGGATCATCTCGAAGACGGTTACAGATGGAGAAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGGATCATGTAATGTGAAGAAGCGTGTGGAAAGGTCTTTCACTGATCCAACAATTGTGGTCACAACATATGAAGGTCAACACACACATCCAAGTCCACTTCTAATGCCTCGCTCTTCATCATCATCATCAATGCCTCAAACCTACTTCTCCCACCAACACTATCTACACCCACATCATCAACAACTCTTATTTAATACATTCCCTTCTCTTGATTTTCCTCCTCCTCCTCCTCCTTCTTCTTCATCTCAGGACACCACCAATAACAATGCATTATTTCCTCTAAGCGACCATGGCCTTCTTCAAGATGTTCTTCCTTCACATATGTTCAAGCAGGAGTAG 852 0.4425 MEKKEIMMSVKMEDASSLFSSCYSNSNNIPLWSVFDLCQETEEKGSLGFMDLLGVHQDYYNGGGGGGAPLLADNNSPSQQPTPTTPKSASPLSSSVSTTTTVDQAAPSSQHADKLLKAKKTNGKKREREARYAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSGSCNVKKRVERSFTDPTIVVTTYEGQHTHPSPLLMPRSSSSSSMPQTYFSHQHYLHPHHQQLLFNTFPSLDFPPPPPPSSSSQDTTNNNALFPLSDHGLLQDVLPSHMFKQE 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00717 283 SUPERFAMILY WRKY DNA-binding domain 135 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g00717 283 PANTHER WRKY TRANSCRIPTION FACTOR 1 243 - -
Aip06g00717 283 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 243 IPR044810 GO:0003700
Aip06g00717 283 SMART WRKY_cls 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00717 283 MobiDBLite consensus disorder prediction 237 264 - -
Aip06g00717 283 Pfam WRKY DNA -binding domain 144 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00717 283 Gene3D WRKY domain 128 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g00717 283 MobiDBLite consensus disorder prediction 72 108 - -
Aip06g00717 283 ProSiteProfiles WRKY domain profile. 138 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g00717 283 MobiDBLite consensus disorder prediction 113 128 - -
Aip06g00717 283 MobiDBLite consensus disorder prediction 66 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00717 Aip-Chr6 9559475 9560819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00717 111 283 WRKY Transcription Factor Family AT2G47260 52.792 4.40e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip06g00717 WRKY 2.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00717 - - aip:107646061 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00717 06 9559475 9560819 Aip06g00717 06 9559475 9560819 ECH
Aip06g00717 06 9559475 9560819 Aip09g01324 09 22321703 22323515 PCT