Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00698 ATGGGGATTGAGCCTCTTTCCTCCACACCATTCAATTTCAGTGGATTCCAAGGCGGTTATGATTCTGTTAATATCCATGAAGAGAAGTTTGTGTTACAAGAGAAGCAAGGTTTCTCAGCATTAATGGAATTAGATAGAGGAGATAATCTGTTCAAACATCAGCAACACAAGCATGATCATGATGATGAAGATATCAAAGTTGGTGACATGATCCTACAAGATGTCATCAATTTTGACCCTGATTATGATAGTCTCCAACCAATTTCACAAGAGTTTCAAGAAACAATAGGACTCAAAAATATTCATCAGGCACCATCGTCTTTGACAATAGCATCATTGGAGCTCTTGAGAAACTATGGAAGCAAGTTCAAGAAGCTAACCGGGGAAAACATAAGCGACAACTTCAGCAGCGACAACATCGAGAATAGTGCTTGTTCGGAGAATCAAAGATTGTCAACTGAAGAAATCATGAGAGTTGCAGGGGCAAGGTATGTGCATTACTCTGCACACTGGAACGATGATTTCTGCATCCCCATGCACCCTTATGGATTGGATCTTGGAAACTTGTCGGAAGAAGAGAACAGAGATGTGGAGCTTGCTCAGTTTCTTCTTGCAGCTGCAGAGAGAGTAGGGTGCCGCCAATTCGAACGTGCCAGCCGCTTACTCCTCCATTGTCAATGGAATTCAGATGTCATCGCAAACGCTGCTCAGAGAGTTATCTTTCATTTCGCCGAAGCGCTTCGCGAAAGGATCAACAAAGAAACTGGAAGGGTAATGGAAGTTGTAATGTCATCATACCATGATAGTCAGAATCAGAATCAGAATAAGAACGAAGAAACTGAAATGATTCTAAAGATGAGTGTCAATGAATCTCTTAAGTGCCATCAGAATCTGCCTTTCAATCAAGTAATGCAATTCCCTGGTGTACAAGCTATGGTGGAAAATCTTGCTTTCGAGACCAAGATACACCTGATAGATCTTCAAATCAGAAGCGGAGTGCAGTGTACGGCTCTGATGCAAGCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTAACCGCCATTGGAACTTGCGCAGAGAAGAACAAAATAGAAGGTACAGGACAAAGGTTAACGAGTTTTGCTGAGTCACTGAACTTGCCGTTTTCATATAAGGCGATTATCGTGGCAGATTTGGCAGAAATCAAGTTGGATGATTTCGACGTCGACGACGATGAAGGCGTTGCTGTGTACTCTGCGTATTTTCTTAGGACTCTGGTTTCAAGGCCTAATTGCTTGGAAAATTTGATGCTGGTTATAAGGAATATAAAACCCTCAGTTATGATAGTGCTGGAGATAGACTCAAATCATAACTCGCCTTCTTTTGTGAACCGATTCATCGATGCGTTGTTCTACTTTTCAGCATTCATGGATTGTCTTGAAACGTGCCTGAAAGAAGATAGCGAGTGCAGAATGGCGGTGGAAGCAGTGTGTGCAGCGGGGATAAGAAACATTGTTGCTGCTGAAGGCAAAGAAAGGACAGTTAGGAATGTGAAGTTAGATGTTTGGAGAAGGTTCTTCGCGAGGTATAAAATGGTGGAAACAGGGTTCAGTGAATCGTCGCTTTACCAAGCTAACTTGGTTGCTAAGGAGTTTACTTTTGGTAAGTTCTGCAGCGTCGACAAAAATGGTAAGAGTCTAACTGTTTCATGGAAGGGAACTCCAATGCATTCACTCTCAGCTTGGAAGTTTGTATGA 1743 0.4159 MGIEPLSSTPFNFSGFQGGYDSVNIHEEKFVLQEKQGFSALMELDRGDNLFKHQQHKHDHDDEDIKVGDMILQDVINFDPDYDSLQPISQEFQETIGLKNIHQAPSSLTIASLELLRNYGSKFKKLTGENISDNFSSDNIENSACSENQRLSTEEIMRVAGARYVHYSAHWNDDFCIPMHPYGLDLGNLSEEENRDVELAQFLLAAAERVGCRQFERASRLLLHCQWNSDVIANAAQRVIFHFAEALRERINKETGRVMEVVMSSYHDSQNQNQNKNEETEMILKMSVNESLKCHQNLPFNQVMQFPGVQAMVENLAFETKIHLIDLQIRSGVQCTALMQAXXXXXXXXXXXKVTAIGTCAEKNKIEGTGQRLTSFAESLNLPFSYKAIIVADLAEIKLDDFDVDDDEGVAVYSAYFLRTLVSRPNCLENLMLVIRNIKPSVMIVLEIDSNHNSPSFVNRFIDALFYFSAFMDCLETCLKEDSECRMAVEAVCAAGIRNIVAAEGKERTVRNVKLDVWRRFFARYKMVETGFSESSLYQANLVAKEFTFGKFCSVDKNGKSLTVSWKGTPMHSLSAWKFV 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00698 580 Pfam GRAS domain family 200 578 IPR005202 -
Aip06g00698 580 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 50 578 IPR005202 -
Aip06g00698 580 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 50 578 - -
Aip06g00698 580 ProSiteProfiles GRAS family profile. 190 578 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00698 Aip-Chr6 9275041 9276783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00698 189 579 GRAS Transcription Factor Family AT2G01570 27.708 1.56e-44 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip06g00698 GRAS 2.2e-71 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00698 - - ahf:112695737 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00698 06 9275041 9276783 Aip06g00698 06 9275041 9276783 ECH