Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00692 ATGGCTCCGATCCAGCGCGCGTTGAGTTCGGGATCGGAAGGTAGCGGAGATCCACCGATAGTGTTGGACGAAAGGAAGAGGAAGAGGATGCTCTCGAATCGTGAATCTGCACGCCGTTCGAGGATGAGGAAGCAAAAGCAGCTGGAGGACCTCACCGAAGAGGTGACGAAGCTGCAGTCGGCGAATAAGAACCTGGCGGAGGCCATCAAGGCGAAGGAGGAAGCCATGACGGAGACTGAGGCCGCCAACGGCGTCCTTAGGGCTCAGATGACGGAGCTTACCGACCGTCTCCGGTTCCTTAACTCGATCCTTGAGATTGCCGAGGATGTCAGTGGACTTTCCGTCGATATACCTGAGATTCCGGATCCGCTTCTGAAGCCATGGCAGATCCCTCACCCGATTCAACCAATCATGGCTTCCGCAGACATGTTCCTGCATTGA 441 0.5601 MAPIQRALSSGSEGSGDPPIVLDERKRKRMLSNRESARRSRMRKQKQLEDLTEEVTKLQSANKNLAEAIKAKEEAMTETEAANGVLRAQMTELTDRLRFLNSILEIAEDVSGLSVDIPEIPDPLLKPWQIPHPIQPIMASADMFLH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00692 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Aip06g00692 146 CDD bZIP_plant_GBF1 26 75 IPR045314 GO:0003700|GO:0006355
Aip06g00692 146 SUPERFAMILY Leucine zipper domain 25 72 IPR046347 GO:0003700|GO:0006355
Aip06g00692 146 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Aip06g00692 146 MobiDBLite consensus disorder prediction 1 52 - -
Aip06g00692 146 Gene3D - 23 76 - -
Aip06g00692 146 Coils Coil 34 82 - -
Aip06g00692 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Aip06g00692 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 144 - -
Aip06g00692 146 Pfam bZIP transcription factor 25 75 IPR004827 GO:0003700|GO:0006355
Aip06g00692 146 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 144 - -
Aip06g00692 146 MobiDBLite consensus disorder prediction 19 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00692 Aip-Chr6 9211976 9213543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00692 8 144 bZIP Transcription Factor Family AT3G62420 57.554 1.20e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip06g00692 bZIP_1 1.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00692 K25786 - gmx:778144 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00692 06 9211976 9213543 Aip06g00692 06 9211976 9213543 ECH
Aip06g00692 06 9211976 9213543 Aip09g01297 09 21619178 21619681 ECH
Aip06g00692 06 9211976 9213543 Aip09g01297 09 21619178 21619681 PCT