Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00690 ATGAACACCACGGTCCTCGATTTCGACTCAGACAAACTTTTGGCCAGTGACTTTCTCAAGAACTTCGCTGACATCAATGGCGAATCAAAATACATGAACATCCTTCAAGATGTAGCAAACCACAAAACTCGTGCTGTCCAGATCGATCTCGACGATTTAATTAATTACAAGGATTTAGACGAGGAATTTTTGAGGCGTGTAACCGAGAATACTAGGAGGTACATTGGGATTTTTTCGGATGCCATTGATGAGATCATGCCGGAACCTACTGAGGCCTTCATAGATGATGACCATGACATATTGATGACACAGAGATCAGACGAAGTTGCAGACGGTGAAGATGGTTCAGACCCACAGCAGAGGATGCCTCCTGAAATCAAGCGCTACTATGAAGTTTATATTAAAGCATCTTCAAAGGGACGACCATATACAATTAGGGAGGTGAAGGCTTCATATATTGGTCAGATTGTAAGAATATCTGGTATAGTGACACGCTGCTCAGATGTTAAACCTTTAATGAAGGTTGCTGTATACACATGTGAAGATTGTGGTTTTGAAATTTACCAGGAAGTAACAGCTCGAGTCTTCATGCCTTTGTTTGAGTGTCCATCCACTCGCTGTAAAATAAATAACAATAAGGGGAACCTTATCCTTCAGCTGAGAGCTTCAAAGTTTTTAAAATTTCAAGAGGCAAAAATTCAAGAATTAGCTGAACATGTTCCAAAGGGCCATATTCCACGAACAATGACTGTTCATTTCAGGGGAGAGCTCACAAGAAAGGTGGCTCCTGGCGATGTGGTTGAATTATCTGGGATTTTTCTTCCTATACCTTACACTGGTTTCAGAGCAATGCGTGCTGGTCTGGTTGCTGACACTTACTTAGAGGCGATGTCTGTAACTCATTTCAAGAAAAAATATGAGGAATATGAACTTAGAGGAGACGAGGAGGAGCAGATTGCACGTTTAGCAGAAGATGGCGACATCTACAATAAATTAGCAAGATCATTGGCTCCTGAAATTTTTGGACATGAAGATATTAAAAAAGCACTGCTTCTTCTTCTTGTTGGTGCTCCCCATCGGAAGCTGAAAGATGGAATGAAGATTAGAGGAGATTTACACATATGTTTGATGGGTGATCCTGGTGTTGCCAAGAGTCAGCTCCTTAAGCATATAATCAATGTAGCTCCAAGGGGGGTGTACACCACTGGAAGAGGTAGTAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAGAGATCCAGTGACAAATGAGATGGTTCTTGAAGGTGGAGCATTGGTGCTAGCAGATATGGGCATATGTGCCATTGATGAGTTTGACAAGATGGATGAATCAGATCGAACAGCTATACATGAAGTCATGGAACAGCAGACTGTTAGCATTGCCAAAGCTGGGATCACTACTTCACTGAATGCAAGGACTGCTGTGCTTGCTGCAGCTAATCCCGCCTGGGGAAGATATGATCTACGAAGAACTCCAGCTGAAAATATTAATCTTCCCCCTGCCCTCCTATCAAGATTTGATTTGCTGTGGTTAATCCTTGATCGAGCTGATATGGATAGTGATCTTGAAATGGCTAGGCATGTTGTCTATGTCCACCAAAATAAAGAGTCCCCTGCACTAGGATTTACTCCTCTTGATCCCTCTGTTCTTCGTGCCTATATATCTGCTGCAAGAAGATCATCTCCCAGTGTCCCAAGAGATCTGGAAGAGTATATTGCAAGTGCATACTCCAGCATTCGACAAGAAGAAGCCAAGTCTAGTACTCCCCATTCATACACAACTGTCAGAACATTGCTCAGTATTCTCCGTGTATCAGCTGCGCTTGCAAGACTCCGTTTCTCTGAAACTGTTGCTCAGAGTGACGTGGACGAGGCACTGAGGTTAATGCAGATGTCAAAATTCTCTTTGTACTCCGATGAACGTCAAAGATCTGGTCTGGATGCCATATCAGATATTTATTCCATTCTGCGTGATGAAGCTGCAAGGAGTGGCAAAACGGATGTCAGCTATGGTGATGCACTGAATTGGATATCTAGAAAGGCGCTTGCAAGACTCCGTTTCTCTGAAACTGTTGCTCAGAGTGACGTGGACGAGGCACTGAGGTTAATGCAGATGTCAAAATTCTCTTTGTACTCCGATGAACGTCAAAGATCTGGTCTGGATGCCATATCAGATATTTATTGCGTGATGCGTGATGAAGCTGCAAGGAGTGGCAAAACGGATGTCAGCTATGGTGATGCACTGAATTGGATATCTAGAAAGAATTCCAAGGCTTGGCTGTGCACCATTGTAGTTGCAATCTCTACATTATCAGGAACAAATTTGTCTTCGAAGGTGATAGAATGCACCCAATTTGTGTCACCAACCAAATTGGAATCAGGAGCGACGAACTTTTGA 2415 0.4302 MNTTVLDFDSDKLLASDFLKNFADINGESKYMNILQDVANHKTRAVQIDLDDLINYKDLDEEFLRRVTENTRRYIGIFSDAIDEIMPEPTEAFIDDDHDILMTQRSDEVADGEDGSDPQQRMPPEIKRYYEVYIKASSKGRPYTIREVKASYIGQIVRISGIVTRCSDVKPLMKVAVYTCEDCGFEIYQEVTARVFMPLFECPSTRCKINNNKGNLILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSVTHFKKKYEEYELRGDEEEQIARLAEDGDIYNKLARSLAPEIFGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHQNKESPALGFTPLDPSVLRAYISAARRSSPSVPRDLEEYIASAYSSIRQEEAKSSTPHSYTTVRTLLSILRVSAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDERQRSGLDAISDIYSILRDEAARSGKTDVSYGDALNWISRKALARLRFSETVAQSDVDEALRLMQMSKFSLYSDERQRSGLDAISDIYCVMRDEAARSGKTDVSYGDALNWISRKNSKAWLCTIVVAISTLSGTNLSSKVIECTQFVSPTKLESGATNF 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00690 804 Pfam MCM AAA-lid domain 555 638 IPR041562 -
Aip06g00690 804 Gene3D - 12 102 - -
Aip06g00690 804 PANTHER DNA REPLICATION LICENSING FACTOR MCM7 38 686 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip06g00690 804 PANTHER DNA REPLICATION LICENSING FACTOR MCM7 653 761 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip06g00690 804 Gene3D - 172 226 - -
Aip06g00690 804 Gene3D - 313 645 IPR027417 -
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 195 207 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 160 171 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 122 134 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 178 189 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 287 297 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip06g00690 804 ProSiteProfiles MCM family domain profile. 328 534 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein family signature 508 516 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein family signature 481 493 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein family signature 429 443 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein family signature 369 384 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 PRINTS Mini-chromosome maintenance (MCM) protein family signature 457 470 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 653 761 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 38 686 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 647 IPR027417 -
Aip06g00690 804 CDD MCM7 331 638 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip06g00690 804 Gene3D - 145 273 IPR012340 -
Aip06g00690 804 Pfam MCM N-terminal domain 16 135 IPR027925 -
Aip06g00690 804 SMART mcm 141 640 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 Pfam MCM OB domain 145 275 IPR033762 -
Aip06g00690 804 ProSitePatterns MCM family signature. 437 445 IPR018525 GO:0003677|GO:0005524|GO:0006260
Aip06g00690 804 Pfam MCM P-loop domain 316 538 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip06g00690 804 SUPERFAMILY Nucleic acid-binding proteins 16 296 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00690 Aip-Chr6 9169490 9176628 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00690 655 761 Core DNA Replication Machinery Family AT4G02060 63.964 1.15e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00690 K02210 - nnu:104605084 1242.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00690 06 9169490 9176628 Aip06g00690 06 9169490 9176628 ECH