Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00658 ATGCGACGCTGGTCATCGGGTCTTCTCTGCAATGCTGCAGCTGGCGCCGCCGCCGGTGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTAATCAAAACTAGGTTTCAGGTTCATGGGGTAGCGCAACTCCATAATGGACGTGTTAAAGCAGGCAGCATCATAGTTGGTAGCTTGGAACAAATATTTCACAAGGAGGGATTGCGTGGCATGTACCGTGGGTTGTCTCCCACTGTGCTAGCTTTACTGCCAAACTGGGCTGTATATTTTACCATGTATGAACAGCTCAAGAGCCTTCTTCAGCCTGAGGATTGCCATAATCTTTCAGTTGGAGCTAATATGATGGCCGCTTCTGGTGCTGGAGCTGCAACAACAATGTTCACAAATCCACTTTGGGTTGTCAAGACTAGACTCCAAACTCAGGGAATGAGATCTGGTGTTGTGCCATATAGGAGCACTCTTTCTGCATTGAGGAGAATTGCACACGAGGAGGGTATTCGAGGGCTGTACAGTGGACTTGTACCTGCGCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCAACATACGAGAAAATAAAATGTTACTTGGCAACTCAAGGTGACACATCAATGGATAAACTTGGTGCACGTGATGTTGCAATTGCCTCATCAGTCTCCAAAATTTTTGCATCAACATTGACATATCCCCATGAGGTTGTACGTTCCAGACTGCAAGAGCAAGGGCACCATTCTGAGAAAAGGTACTCGGGTGTGATTGATTGCGTTCGGAAGGTTTTTCAGCAAGAGGGCGTACCTGGGTTTTACCGTGGGTGTGCCACCAACCTTCTGAGGACAACACCAGCTGCTGTAATCACATTCACAAGCTTTGAAATGATACATCGTTTTCTTGTTTCGGTTTTTCCGTCTGATCCGCAGCCTCAGATTTTGTGA 933 0.4684 MRRWSSGLLCNAAAGAAAGVIAATFVCPLDVIKTRFQVHGVAQLHNGRVKAGSIIVGSLEQIFHKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSLLQPEDCHNLSVGANMMAASGAGAATTMFTNPLWVVKTRLQTQGMRSGVVPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKCYLATQGDTSMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVRKVFQQEGVPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSVFPSDPQPQIL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00658 310 Gene3D Mitochondrial carrier domain 2 103 IPR023395 -
Aip06g00658 310 Gene3D Mitochondrial carrier domain 104 300 IPR023395 -
Aip06g00658 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 296 IPR018108 -
Aip06g00658 310 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 309 IPR044712 GO:0006862|GO:0055085
Aip06g00658 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 196 IPR018108 -
Aip06g00658 310 Pfam Mitochondrial carrier protein 8 101 IPR018108 -
Aip06g00658 310 Pfam Mitochondrial carrier protein 214 298 IPR018108 -
Aip06g00658 310 Pfam Mitochondrial carrier protein 108 198 IPR018108 -
Aip06g00658 310 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085
Aip06g00658 310 PRINTS Mitochondrial carrier protein signature 24 38 IPR002067 GO:0055085
Aip06g00658 310 PRINTS Mitochondrial carrier protein signature 123 141 IPR002067 GO:0055085
Aip06g00658 310 PRINTS Mitochondrial carrier protein signature 11 24 IPR002067 GO:0055085
Aip06g00658 310 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085
Aip06g00658 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 99 IPR018108 -
Aip06g00658 310 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 5 309 - -
Aip06g00658 310 SUPERFAMILY Mitochondrial carrier 9 292 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00658 Aip-Chr6 8600493 8603642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00658 5 310 Chloroplast and Mitochondria Gene Families AT2G47490 79.085 5.44e-165 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00658 K15115 - gmx:100500213 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00658 06 8600493 8603642 Aip06g00658 06 8600493 8603642 ECH