Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00656 ATGTCTAGTGTGGTGGAGTCTAAGAGTGATGGTTGTTATTATTCGGTGCTTGGGGTTCGCAAGCACTCAACCGATCACGAAATTCGTTGCGCTTATCGTAAGATGGCCCTGAAATGGCACCCTGATCGGTGGATCAAAGAACCAAAGCTTGCGGTGGAAGCAAAGAAACAGTTTCAGCATATTCAAGAGGCATATTCAGTTTTGTCTAATAAAGGGAAGAGAATGATATATGACGCGGGAATGTTTGGTTTTATTGGAGAAGACGATGATGAGGGATTTGTTGATTTCATGCAAGAAATGGTCTTGACAATGCAGAAAGTGAAACACCAGGGTGAGAAATGCATGATGGAGGATTTTCAGGGAATGCTAATGGATATGATAGCAGAAAGTGATGAAGGGAGGGGCAAATCCGGGTTATGTTGGAGCTCCTCTAATAGTCCTAAGAAAAAGACACGTATCTTATAG 465 0.4258 MSSVVESKSDGCYYSVLGVRKHSTDHEIRCAYRKMALKWHPDRWIKEPKLAVEAKKQFQHIQEAYSVLSNKGKRMIYDAGMFGFIGEDDDEGFVDFMQEMVLTMQKVKHQGEKCMMEDFQGMLMDMIAESDEGRGKSGLCWSSSNSPKKKTRIL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00656 154 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Aip06g00656 154 PANTHER PUTATIVE, EXPRESSED-RELATED 5 153 - -
Aip06g00656 154 MobiDBLite consensus disorder prediction 135 154 - -
Aip06g00656 154 SMART dnaj_3 11 73 IPR001623 -
Aip06g00656 154 SUPERFAMILY Chaperone J-domain 11 100 IPR036869 -
Aip06g00656 154 PRINTS DnaJ domain signature 14 32 IPR001623 -
Aip06g00656 154 PRINTS DnaJ domain signature 32 47 IPR001623 -
Aip06g00656 154 PRINTS DnaJ domain signature 53 73 IPR001623 -
Aip06g00656 154 Gene3D DnaJ domain 1 84 IPR036869 -
Aip06g00656 154 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Aip06g00656 154 MobiDBLite consensus disorder prediction 137 154 - -
Aip06g00656 154 Pfam DnaJ domain 13 78 IPR001623 -
Aip06g00656 154 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 5 153 - -
Aip06g00656 154 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00656 Aip-Chr6 8553795 8555089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00656 12 79 C2H2 Transcription Factor Family AT1G74250 46.377 2.26e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00656 - - pvu:PHAVU_001G210400g 219.164