Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00645 ATGGAGCTCGCCACCACCATCTCCGATCTCAACCAGACCACAATACCCAGTAGGCGCCACCACGACTCGCAGACTCTTCTGAGTGCAGCCATGACCAACTTGTACACGTGTCTCGATGGCTTCGCTTACTGCAAGGGGAGTCACGTGAGGGAAAGGTACCTGCAGGACAAGTTGTTTCAGATTTCTAATCATGTTAGTAACTCCCTCGCCATGCTCAAGAAGGTTCCCGGAGTGAAGAAGCCTTCCAAATTGGAGGTCTTCCCGGAATATGGGAAGATGAAGGGACATTTTCCCACCTGGATTACTAACAAAGACCGCAAGCTGCTTCAAGCTTCTGTGAATCAGACTAAGTTCAATCTTGTTGTGGCCCAAGATGGCACTGGAAACTTCAAAACTATAGCGGAGGCGCTGGCTGCTGCTCCCAACTCGAGCACAACCAGGTTTGTGATACACATAAAAGCTGGAGCGTATTTTGAGAACGTGGAGGTGATTAAGAAGAAGACGAATTTGATGCTGGTGGGTGATGGAATCGGAAAAACCGTCGTGAAGGCCAGTAGGAATGTCGTCGACGGCTGGACCACTTTCCAGTTCGCTACTTTTGCTGTAGTAGGAGACGGATTCATAGCAAAAGGCATAACCTTTGAGAACTCGGCGGGACCCCGCAAGCACCAGGCCGTGGCCGTAAGAAACGGTGCAGATCTCTCAGTATTGTACCAATGCAGTTTCGTGGCATACCAAGACACCCTGTACGTCCATTCCCTACGCCAATTCTACCGTGACTGCGACGTATACGGCACCGTAGACTTCATCTTCGGCAACGCCGCCGTCGTCTTCCAAAACTGCAACCTATATGCACGTAAGCCCGATCCAAACCAAAAGAACCTCTTCACCGCACAGGGCAGAGAAGACCCCAACCAGAACACGGGAATATCAATCTTGAACTGCAAGGTTACAGCCGCATCGGATCTAATCCCGGTGAAGTCGTCGTTCAAGACTTACCTTGGTAGGCCATGGAAGCTGTATTCAAGAACAGTTTTTATGAAATCATTCATTGACGATCTGGTTGACCCTGCGGGGTGGTTGGAGTGGAATGGAACCTTTGCGTTGGACACGTTGTATTATGGTGAGTACCAAAATAGGGGTCCTGGTTCGAACACAAGCGCTAGGGTTAAGTGGCCTGTTATAGAGTCATAA 1194 0.4983 MELATTISDLNQTTIPSRRHHDSQTLLSAAMTNLYTCLDGFAYCKGSHVRERYLQDKLFQISNHVSNSLAMLKKVPGVKKPSKLEVFPEYGKMKGHFPTWITNKDRKLLQASVNQTKFNLVVAQDGTGNFKTIAEALAAAPNSSTTRFVIHIKAGAYFENVEVIKKKTNLMLVGDGIGKTVVKASRNVVDGWTTFQFATFAVVGDGFIAKGITFENSAGPRKHQAVAVRNGADLSVLYQCSFVAYQDTLYVHSLRQFYRDCDVYGTVDFIFGNAAVVFQNCNLYARKPDPNQKNLFTAQGREDPNQNTGISILNCKVTAASDLIPVKSSFKTYLGRPWKLYSRTVFMKSFIDDLVDPAGWLEWNGTFALDTLYYGEYQNRGPGSNTSARVKWPVIES 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00645 397 Gene3D - 113 397 IPR012334 -
Aip06g00645 397 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 75 IPR035513 -
Aip06g00645 397 PANTHER PECTINESTERASE 2 393 - -
Aip06g00645 397 ProSitePatterns Pectinesterase signature 2. 263 272 IPR033131 -
Aip06g00645 397 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 6 75 IPR035513 -
Aip06g00645 397 Pfam Pectinesterase 119 395 IPR000070 GO:0030599|GO:0042545
Aip06g00645 397 CDD PMEI-like_3 2 77 - -
Aip06g00645 397 PANTHER PECTINESTERASE 2 393 - -
Aip06g00645 397 SUPERFAMILY Pectin lyase-like 116 393 IPR011050 -
Aip06g00645 397 Pfam Plant invertase/pectin methylesterase inhibitor 5 71 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00645 Aip-Chr6 8416623 8420279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00645 3 393 Carbohydrate Esterase AT4G02320 59.113 9.49e-174 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00645 K01051 - gmx:100813592 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00645 06 8416623 8420279 Aip06g00645 06 8416623 8420279 ECH