Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00640 ATGTGTGTGATAAGAACAAAACGTAGTGTCGTTAAGCCAGCTGAAGAGACACCATTGACCACACTAGACCTATCATTGATCGATAAGATACCTGTTCTAAGGTGCGATGCCAGAACGTTGCATGTGTTCAGCCATGGCCCTGAAGCTGCAAGTGTCATAAGAGAAGCCTTGTCTAGAGCATTGGTTCCTTATACCCTCTTGCTGGGCGCCTCATTCACAAATCGGAACAAAATGATGAAGCAGGGTGCCTCCAAGTTCAATGCTCCGGGGACGTCTATTCCGTATGATCATCTTCTTCCTGATGATGTTCCTCAAACCGAAGGCATTGACCCCCTTGTCAAAATGCAGGTGACACAATTTGGATGTGGAGGATTTGTGATAGGCCTCGTATTCTGCCACACCATATGCGATGGCCTTGCCTTGTCGCCACCTCCACTCCCTAAACTACCACCAACCATGCCAAGCTACAAGCTAGAACACGCTACCGTAGACATCCCCATGCATCGAATCAACAACCTCAAGCAAGACTTTCAGCGGCTCACCGGACTCGCTTGCTCTTCCTTCGAAATCGTAGCCGCGGGATTATGGACAAGCAGAGCAAGAGCCATTGATTTCGAATCCAACGCCGAGCTGAAGCTTGTGTTCTTCGCTAACTGCCGTCAAATCTTGGACCCTCCTCTCCCCGCTGGCTTCTACGGCAACTGTTTCTTCCCAGTGACGATCACCGCTTCCTACGAGTCGCTCAGAGACGCGTCGCTCTTCGATGTGGTGAAAATGATACAAGATGCAAAGACCAAATTACCGTCCGAGTTTGGCAAGTATTTGAAGGCCACTGGCCACAGTGCATTGGATGCAGAGTCAGAGAGAGTTGTGGCACATGGTCTATCCACAATTAAAAATGCAGATGTCATTGTTGTGGAAAAGGAAAGGCATGAGACTCTGAGTAAGGCGGACGTATTTTATGCTTCCTTGCTCCAACTTCATTCTAGTGCCCAGTGCCCCAAGAGTTTAACAGTAGCTTCATGCCTCCATTCTCTCCTATGTGCTGCTGGCGCCGTAGCGGTGGCTCAACCTCTCCCAGTCTCGCACCATCTTGATCGCTCTCCTCTCTTCTCCTCTGTCAGTACTCTGCCTGTCCTGCTTCTCTCTCAATCTCTCCTTTCATTTCTCTTCTCGCTGCTGTGTTGTTGTTGTTGCTGCCGTTGGCTTTGCAGATTCTTCTATGCTCCTTATCGATAG 1239 0.4931 MCVIRTKRSVVKPAEETPLTTLDLSLIDKIPVLRCDARTLHVFSHGPEAASVIREALSRALVPYTLLLGASFTNRNKMMKQGASKFNAPGTSIPYDHLLPDDVPQTEGIDPLVKMQVTQFGCGGFVIGLVFCHTICDGLALSPPPLPKLPPTMPSYKLEHATVDIPMHRINNLKQDFQRLTGLACSSFEIVAAGLWTSRARAIDFESNAELKLVFFANCRQILDPPLPAGFYGNCFFPVTITASYESLRDASLFDVVKMIQDAKTKLPSEFGKYLKATGHSALDAESERVVAHGLSTIKNADVIVVEKERHETLSKADVFYASLLQLHSSAQCPKSLTVASCLHSLLCAAGAVAVAQPLPVSHHLDRSPLFSSVSTLPVLLLSQSLLSFLFSLLCCCCCCRWLCRFFYAPYR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00640 412 PANTHER ACYL TRANSFERASE 4 1 71 - -
Aip06g00640 412 PANTHER ACYL TRANSFERASE 4 148 279 - -
Aip06g00640 412 PANTHER ACYL TRANSFERASE 4 87 140 - -
Aip06g00640 412 PANTHER ACYL TRANSFERASE 4 148 279 - -
Aip06g00640 412 PANTHER ACYL TRANSFERASE 4 87 140 - -
Aip06g00640 412 Pfam Transferase family 157 266 - -
Aip06g00640 412 Pfam Transferase family 97 141 - -
Aip06g00640 412 Pfam Transferase family 5 69 - -
Aip06g00640 412 PANTHER ACYL TRANSFERASE 4 1 71 - -
Aip06g00640 412 Gene3D - 3 79 IPR023213 -
Aip06g00640 412 Gene3D - 80 142 IPR023213 -
Aip06g00640 412 Gene3D - 143 319 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00640 Aip-Chr6 8368442 8372489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00640 9 271 Monolignol Biosynthesis Gene Families AT5G48930 26.113 1.40e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00640 - - aip:107646575 457.988