Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00633 ATGAGTCGAGAACAGCATAAGCGAGGGAAGGAAGAAAAAAGTTCAGATGGTGTTGAGAAGGTTATTGTTGCTGTTAAGGCATCAAAGGAAATTCCAAAGACAGCACTTGTTTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACACTAATAGTGGTTGTGCCTTCTTCACAAAGTTTTGGAAGAAGATTATGGGGTTTTCCAACGTTTGCCGGTGACTGTGCCAACACCCAAAAGAAATCTCATTCACCAACTAGTTCAGAGCAGAAGAGTGAGATTACTGATTCTTTCTCTCAGATGATTCTTCAGCTCCATGACATCTATGATCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCCGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCTAGAAAGGCCCAAGCCAATTGGGTTGTATTAGACAAGCAGCTAAAACAAGAAGAAAAGCAGTGTATGGAAGAGCTGCATTGCAACATTGTTGTTATGAAACAATCCCAAGCGAAAGTGCTCCGGTTGAATTTGAATGGATCACAAAAGAAGGATCTTGAAGAAGCAGCTCCATTACATTCCAAGCAAGATGGGAAGCTTGGAAGACAAGCCAAGAATAAGAATGATTCTTTGAGTTCCATAAAAGGAGCAGTTGTCACCCCAACTAGTAGTCCAGATGTAGGGACGCCTTCTACGGCGACTGAAGCCGGTACTTCATCTGTTTCAAGCTCTGATCCTGGAACTTCACCATTCTTTGTTTCTGAGATGAATAATGGTGAGTCAAAGAAAGAGGAAACTATTAAACAAAATGAAGTTGTTGATGCTAGTTCAGACTCGGACAGCGAAAAGTTGTCCCTATCCTCAGCAACCTTGAGATTCCAACCATGGATCAAAGATTTACTTTTATGCAAACAATCATCTCAATGCAGAGAAGAAGGATGCCATAGCAAGAATCAAACATCCACAGCTAGAGCTTTGATGGAAAAGTTCTCAAGGCTAGAAAGAGAAGCTGAAATGGAGATCTCAAGCCATGACAGCATAAACTCGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCAGAGGTTGAAGTCCTCAGCTGTGCTCAGCATAATGCTCATTGGATTCTGTATTGAGAATAAGAGAAGGTTGCTGGTTTATGAGTACATATGTAATGGATCTTTGGACACTCATATGGAACCATTAGAATGGTCAGCACGTCAAAGAATTGCCGTTGGAGCTGCTAGGGGCTTGAGATATCTTCATGAGGAGTGCAGAGTAGGCTGCATTATCCACCGTGACATGCGGCCGAATAACATTCTTATCACCCATGATTTTGAGCCACTGGTTGGTGATTTTGGGCTAGCAAGGTGGCAGCAACATAGAGACACTGGTGTGGAAACTAGAGTGATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACAGAAAAGGCTGATGTTTACTCCTTTGGGGTGGTATTGGTGGAGCTTGTTACCGGACGAAAAGCTGTTGATCTTAGCAGGCCGAAGGGGCAGCAATGTCTTACTGAATGGGCACGACCATTGCTAGCAGAATATGCAATTGAGGAACTAATTGATCCGAGATTGGCAAATAACTATGCAGAAAATGAGGTCTATTGCATGCTTCATGCAGCTTCATTATGCATGAGGAGAGATCCTTATTCCAGACCACGCATGTCACAGGTTCTCAGAATACTGAAGGGTGACATGATCATGGTCATGGAGACAAATTACATTACAGCTACCACTCCCACCACCACATAA 1800 0.4278 MSREQHKRGKEEKSSDGVEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLIVVVPSSQSFGRRLWGFPTFAGDCANTQKKSHSPTSSEQKSEITDSFSQMILQLHDIYDPNKINVKIKIVSGSPCGAVAAEARKAQANWVVLDKQLKQEEKQCMEELHCNIVVMKQSQAKVLRLNLNGSQKKDLEEAAPLHSKQDGKLGRQAKNKNDSLSSIKGAVVTPTSSPDVGTPSTATEAGTSSVSSSDPGTSPFFVSEMNNGESKKEETIKQNEVVDASSDSDSEKLSLSSATLRFQPWIKDLLLCKQSSQCREEGCHSKNQTSTARALMEKFSRLEREAEMEISSHDSINSLVLRVMLNFAQRLKSSAVLSIMLIGFCIENKRRLLVYEYICNGSLDTHMEPLEWSARQRIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQQHRDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLSRPKGQQCLTEWARPLLAEYAIEELIDPRLANNYAENEVYCMLHAASLCMRRDPYSRPRMSQVLRILKGDMIMVMETNYITATTPTTT 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00633 599 CDD USP_Like 20 144 - -
Aip06g00633 599 MobiDBLite consensus disorder prediction 258 278 - -
Aip06g00633 599 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 370 590 - -
Aip06g00633 599 SUPERFAMILY Protein kinase-like (PK-like) 371 586 IPR011009 -
Aip06g00633 599 PANTHER OS01G0253100 PROTEIN 16 351 IPR045271 GO:0004714|GO:0006468
Aip06g00633 599 Gene3D Transferase(Phosphotransferase) domain 1 389 592 - -
Aip06g00633 599 Gene3D HUPs 3 176 IPR014729 -
Aip06g00633 599 MobiDBLite consensus disorder prediction 185 279 - -
Aip06g00633 599 ProSitePatterns Tyrosine protein kinases specific active-site signature. 429 441 IPR008266 GO:0004672|GO:0006468
Aip06g00633 599 PANTHER OS01G0253100 PROTEIN 370 590 IPR045271 GO:0004714|GO:0006468
Aip06g00633 599 MobiDBLite consensus disorder prediction 186 204 - -
Aip06g00633 599 Pfam Protein kinase domain 361 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00633 599 ProSiteProfiles Protein kinase domain profile. 252 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00633 599 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 351 - -
Aip06g00633 599 MobiDBLite consensus disorder prediction 205 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00633 Aip-Chr6 8180988 8184047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00633 370 595 Trihelix Transcription Factor Family AT1G70460 50.420 2.39e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip06g00633 Pkinase 7.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00633 - - han:118491693 597.816