Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00622 ATGGAATTATCATTATTCAAGAATAATAATAACACCTTGTACCCTCTTATTAGAATTTATGTTTTCCTATTTCAGCTTTCTTTGTTTGCATCCTTGTCCATAGCAGCATATAACAATGGAGCTTATGTTCCAACAGAAACGGTTTGCAACTCCACCATGTACCCTTCTTACTGCAAATCAGTGCTTGCTAATCAACACGGCAATATCTATGACTATTGCCGCGTTTCAGTTAGAAAGTCTTTATCCCAATCTAGAAAGTTCTTGAACGCCGTCAACTCTTATCTTCAACAAGGTGGAAATTCTTACTCTCAAACCACAATCCGCGCTCTCCAAGATTGCAAATTCCTCGCCGAACTCAACTTGGAGTTCTTGTCAAACACCCTTGACACGGTTCAAAAAGCCGGTGATGTTCTTCACACCGGTGAAGCTGATGATTATCACACAGTGCTCAGTGCTGTTTTGACAAACCAACAAACATGTTTGGGTGGATTGCAAACCACGGCTTCTGATCAGAGAGTCAAAGATGAACTTTCCTCTCTGCTCTCAGAGGATACAAAGCTTAACAGCGTCTCTCTTGCTATGTTCGTTGATGCTTGGATTCCTCAGGAGCAAACTACATCGTGGGAAGAACAAAGTCACGGCCAGCGTGGCAGAAAACTACTAAGCTTGGAAGACATGGAAGACGTTTCTGTGAAAGATATTGTGGTTGTTAGTAAGGATGGAAGTGGAAACTTCACCACTATCAATGAAGCTATAAAGGCTGCACCCAATAACTCTGTTGCTACCGACGGCTATTTCGTAGTCTTCATCACCGAGGGTGTGTATGAAGAGTACGTATCTATAGACAAGAAGAAGAAGTACTTGATGCTGATTGGAGATGGAATCAATCGGACAGTTATCACTGGTGATCACAATGTTGTTGATGGTTTCACAACATTCAACTCAGCAACATTTGCTGTGGTGGCGGAAGGATTTGTTGCGGTCAACATAACATTCCGCAACAGTGCGGGACCAAGCAAGCACCAAGCAGTGGCAGTGAGAAATGGAGCAGATTTGTCCACCTTCTATGGCTGCAGCTTTGAAGGTTACCAAGACACTCTGTACACACATTCCATGAGGCAATTCTACCGTGAATGCGATATTTACGGCACAGTTGATTTTATATTTGGAAATGCAGCGGTTGTTTTACAAAACTGCAACTTATATCCCCGCCTTCCAATGAGTGGACAATTCAATGCCATCACGGCTCAAGGCCGAACCGATCCGAACCAAAACACTGGCATTTCCATACAGAACGCAACCATTAAAGCCGCTGACGATTTGGCTCCGGTGGTTGGTAGTGTGTCAACCTACCTTGGGAGGCCGTGGAAGGAGTACTCAAGGACAATTTATATTCAGAGTTTTATGGATAGTTTGATAGCTCCAGTTGGGTGGAGTAATTGGAATGGAGATTTTGCACTGAGCACTTTGTACTATGCTGAGTACAATAACATGGGACCTGGTTCAAGCACTGCTAATAGAGTGAATTGGCCTGGCTATCATATTATCAATGATATTGATGCAGCTAATTTTACTGTCTCCAAATTCTTGGATGGGGATGCTTGGTTGCCTCCCACTAACGTTCCATTTCAGACATCATTGTAA 1644 0.4307 MELSLFKNNNNTLYPLIRIYVFLFQLSLFASLSIAAYNNGAYVPTETVCNSTMYPSYCKSVLANQHGNIYDYCRVSVRKSLSQSRKFLNAVNSYLQQGGNSYSQTTIRALQDCKFLAELNLEFLSNTLDTVQKAGDVLHTGEADDYHTVLSAVLTNQQTCLGGLQTTASDQRVKDELSSLLSEDTKLNSVSLAMFVDAWIPQEQTTSWEEQSHGQRGRKLLSLEDMEDVSVKDIVVVSKDGSGNFTTINEAIKAAPNNSVATDGYFVVFITEGVYEEYVSIDKKKKYLMLIGDGINRTVITGDHNVVDGFTTFNSATFAVVAEGFVAVNITFRNSAGPSKHQAVAVRNGADLSTFYGCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIKAADDLAPVVGSVSTYLGRPWKEYSRTIYIQSFMDSLIAPVGWSNWNGDFALSTLYYAEYNNMGPGSSTANRVNWPGYHIINDIDAANFTVSKFLDGDAWLPPTNVPFQTSL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00622 547 PANTHER PECTINESTERASE 26 546 - -
Aip06g00622 547 Pfam Plant invertase/pectin methylesterase inhibitor 46 194 IPR006501 GO:0004857
Aip06g00622 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 196 IPR035513 -
Aip06g00622 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 195 IPR035513 -
Aip06g00622 547 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
Aip06g00622 547 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 26 546 - -
Aip06g00622 547 SUPERFAMILY Pectin lyase-like 232 544 IPR011050 -
Aip06g00622 547 Pfam Pectinesterase 235 533 IPR000070 GO:0030599|GO:0042545
Aip06g00622 547 Gene3D - 228 547 IPR012334 -
Aip06g00622 547 SMART PMEI_2 38 194 IPR006501 GO:0004857
Aip06g00622 547 CDD PMEI-like_3 47 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00622 Aip-Chr6 8099514 8101431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00622 23 547 Carbohydrate Esterase AT4G02330 54.594 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00622 K01051 - gmx:100792847 801.201