Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00618 ATGTCTACTATTCTCTGTGCTTGGAGTTTTGCCGTCCACAATTTCGTAGGTGAAAGCTGTGTTGGGGTCAGTGTGAAGCTTCGTTTGGTCGACCTGCACGGAGATGATGGTCCACGGTGGAGGAGAACGCAGGATTTAACGGCGCGGAAGCACAGATCGAGATCTGGCCGTCTTGAGGTTCACACTAAGGGAAGGGAATTGACCACACACGACAACGAGATTCATAGTCGAATGGATTTGTGGAGCGAAACTATGAGTTTTCATATAATTTTGACCGAGTACATGCATCGCAGAGGAAGTAGAAGCGATGTATTCGTCCACCACAGATGCAGACATAGATGCAGAGCAGCAGTGAGGATTGTTGACGGGATAGGGTCCTTCGGTGCAATTGAATTTTCTTCCCTGACAGTCAAGGACGTCCTTACGACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACGAATACGGTCGCAGCAAGGGATTCTCGGTCAGGAGGTCCAAGGTGGGTCGCAGAACAAAGCAGGGGGCGGAGGGCGAAATCATTTGGCAGATATTTGTGTGCTCGGGGGAAGGAGAGCGAGACGGAAAACACATGCAGCGGGAAGACAGGAAGATGGATCCTCGACCAATCACGCGGTGCGGGTGTGAAGCCCGGATTAAGGCCCACGTTGATGATGCCAGCGGGCAATGGTTTGTTGAACAATTCTGCGATAACCATAATCATCCCATGCTGGATGCGAGGATTATATATAATGCGATAGAGAAGCAAAGGCGGGCTAGCGTGACAGATGCTGAGGCCGCGTTGAAGTTCTTAGGAACTTTAAGGACCACTGATTCTGGGATGTTCTGGAGGTACTTGCTGGATATTGACAAGAGGCTAGAAAATCTCTTCTGGTGCGATGGTACAAGTCGTTATGACTACAGCGTGTTCGGGGATGTCCTGGGTTTTGATGCAACGTACGGTCATAACAAATACAAGTGCCCTTTGGTAATATTCTCAGGGGTGGACCATCATATGAGGACGGTGGTGTTCGGCTGCGCCATCTTGTGCAACGAGAGCGAAGGAAGCTATGTGTGGTTGTTGCGGTCATTTCTTGAGGCAATGAAAGGAAAACAGCCGAAATCTGTCATCACGGACGGGGACTTCACCATGAAGAATGCGGTTAGTACAGTTTTCTCTGGTGCACATCACAGTTTGTGTAGCTGGCATTTGTTAAGGAACGCCACTGCTAGAGTTGGACGGCCGGGTTTTCTTAGGAAATTCTGTCTATGCTTGATGGGAGATCTAGAGGTTGACGAATTTGAGAGAATATGGACGGATAGCGTGGCAGAGCACGGGTTGAAGGATCATATGTGGATAGCGGACATGTATGAAAAGAAGCATTCATGGTCTAATGCGCATATCCGGGGGAAATTTTTTGCAGGACTGAAGAATACATCGAGGTGCGAAGCTTTGAATATGAAGCTTGGGAAATTTATACACAATGGGTACAATCTGAGGGAGTTTGTGGAGCACTTCCAACTCTATCTGAAATTCATGAGGAGAAGAAAACTAGTGGCAGACTACAAGTCTGCGTACGGCGAGCCTGTTGTAAAAACGAAACTCGAAGCCATTGAGCAATTCGCTGCGACGGTTTATACAAGAGAGGTTTTCGAACTGTTTCGGGAGGTGCTGATGCTAGCCAGCAATGTGAGAGTTGTGTCCAACAAGAGTACGAGCGCTTGTGTTTTGTTCAAGGTTGCAATGTACTGCAAGCAGAGATCATGGGCCGTGTCGTGGGCCGAGGAAGACGACAAATTCAGCTGTTCTTGTCAGTGA 1827 0.4849 MSTILCAWSFAVHNFVGESCVGVSVKLRLVDLHGDDGPRWRRTQDLTARKHRSRSGRLEVHTKGRELTTHDNEIHSRMDLWSETMSFHIILTEYMHRRGSRSDVFVHHRCRHRCRAAVRIVDGIGSFGAIEFSSLTVKDVLTTEFTSLQAAYDYYNEYGRSKGFSVRRSKVGRRTKQGAEGEIIWQIFVCSGEGERDGKHMQREDRKMDPRPITRCGCEARIKAHVDDASGQWFVEQFCDNHNHPMLDARIIYNAIEKQRRASVTDAEAALKFLGTLRTTDSGMFWRYLLDIDKRLENLFWCDGTSRYDYSVFGDVLGFDATYGHNKYKCPLVIFSGVDHHMRTVVFGCAILCNESEGSYVWLLRSFLEAMKGKQPKSVITDGDFTMKNAVSTVFSGAHHSLCSWHLLRNATARVGRPGFLRKFCLCLMGDLEVDEFERIWTDSVAEHGLKDHMWIADMYEKKHSWSNAHIRGKFFAGLKNTSRCEALNMKLGKFIHNGYNLREFVEHFQLYLKFMRRRKLVADYKSAYGEPVVKTKLEAIEQFAATVYTREVFELFREVLMLASNVRVVSNKSTSACVLFKVAMYCKQRSWAVSWAEEDDKFSCSCQ 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00618 608 Pfam FAR1 DNA-binding domain 153 247 IPR004330 -
Aip06g00618 608 PANTHER OS02G0262500 PROTEIN 139 247 - -
Aip06g00618 608 Pfam MULE transposase domain 316 410 IPR018289 -
Aip06g00618 608 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 259 576 IPR031052 GO:0006355
Aip06g00618 608 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 139 247 IPR031052 GO:0006355
Aip06g00618 608 PANTHER OS02G0262500 PROTEIN 259 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00618 Aip-Chr6 8065334 8069058 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g00618 FAR1 3.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00618 - - ahf:112777976 894.804