Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00615 ATGCACTCGAATGACACTAGTGGCGACTGGGTGGAGCAGATAACCAAATGGGTGTCGAGGACATCAGGAACCCCCACTCCCATATACGGCCGCCATATGAACTGCACATTAGTTACGAAGAGGCCGATTAGAAAAATTATTCTTCTGAATAAAAATATTGGATATTACTGGTTACAACTTACATCGTCAGATGTCAAGTCCCATGTCGTCGAGTCCTCGCCTAAAATGCGCAATAGGCCTCCGTATATATCTTGTATGCTTCGATGGTGCAACCAGCTCTCCCCACCCGTGGAGCATCGGGCCTTCACCCCCGAAGAGGACGATACCATAATCAGAGCTCACACTCGGTTCGGCAACAAGTGGGCCACCATAGCCCGACTCCTTTCCGACAAAACTGACAATGCCATTAAGAACCACCGGAACTCCACCCTCAAACGCAAGTGCGCCTCCATAGGCCCCATCGACGATCCTCACTTCGCGCAGCCACTCAAACGCTCCGTCAGCACCAGCGCCGCCGTACCCGTGTCAACGGTGGTGGTGAGGTACTCGTTGCCGACGGTGATGGCGACGATGGAGGTGGCGGGCCGTGGCCCAACTCATCCATGCCCTTCACCACTTTGA 621 0.5362 MHSNDTSGDWVEQITKWVSRTSGTPTPIYGRHMNCTLVTKRPIRKIILLNKNIGYYWLQLTSSDVKSHVVESSPKMRNRPPYISCMLRWCNQLSPPVEHRAFTPEEDDTIIRAHTRFGNKWATIARLLSDKTDNAIKNHRNSTLKRKCASIGPIDDPHFAQPLKRSVSTSAAVPVSTVVVRYSLPTVMATMEVAGRGPTHPCPSPL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00615 206 Pfam Myb-like DNA-binding domain 101 139 IPR001005 -
Aip06g00615 206 Gene3D - 100 164 - -
Aip06g00615 206 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Aip06g00615 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 148 IPR017930 -
Aip06g00615 206 PANTHER TRANSCRIPTION FACTOR MYB73 84 172 - -
Aip06g00615 206 PANTHER MYB PROTEIN-RELATED 84 172 - -
Aip06g00615 206 SUPERFAMILY Homeodomain-like 83 148 IPR009057 -
Aip06g00615 206 SMART sant 98 146 IPR001005 -
Aip06g00615 206 CDD SANT 101 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00615 Aip-Chr6 8034864 8037654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00615 84 173 MYB Transcription Factor Family AT4G37260 63.000 4.05e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip06g00615 Myb_DNA-binding 2.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00615 K09422 - aip:107641435 221.09