Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00604 ATGGTGGTTGCAAAAGGGAACAAAAATGGTTATGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAGACTTGTGTGTTCATTCACTAGCACAATTCTCCAACACTGCGGGAACAAGTCCTAGCAAATGGGCACGTGCTGGGGTATCAGTGACAATAGGCGAGGTAAAGAAAGTTCGAGCATACTTGGCACAGTTGAAAAGAAACGGAGGATTCATAGGAAGAAACAGAGCTGCACTTTCAGATTGTGCTGAGGTTTTTGATGATGCACTTGATGAGCTTCATAGATCACTTGATGTGCTAAGAAAGCTTAGCAAAACCACGTTTAGCACACAAATGGGGGATCTTAATACGTGGATTAGCGCCGCGCTAACCGATGAAGACACTTGCCTTGATGGATTTTCATTTCAAGTCCAAGATGATAATAATAATAATAATCATAACAATAATAAGAAGAAGCAGATCAAGTTGCTGCAGAGGAGGGTCCAGAATGTTTCTTACATAACCAGCAATGCTCTAGCTCTTGTTAACAAGCTTGCTACCACAGGTACTCTCAGCTTCCAGAACATGCTGCAGCAAGTACCACCTCCAAACTACCCTTCTCATCAACATCATCATGCTGTTTTTGTTGCCATCCAAGTGGGACTGAGGCAACAAGCGCATCTTAACAACAACGTGAACAACAAAAACAGGTTGATGAGTAGCAGTAGTAATGATTCATCAAGGGAGGAATGGGTCCAGAGAAGAAGTGATGGTCAAAGAGAACCAATGAACTTAACCCCTTAA 783 0.424 MVVAKGNKNGYVREACSVTRYQDLCVHSLAQFSNTAGTSPSKWARAGVSVTIGEVKKVRAYLAQLKRNGGFIGRNRAALSDCAEVFDDALDELHRSLDVLRKLSKTTFSTQMGDLNTWISAALTDEDTCLDGFSFQVQDDNNNNNHNNNKKKQIKLLQRRVQNVSYITSNALALVNKLATTGTLSFQNMLQQVPPPNYPSHQHHHAVFVAIQVGLRQQAHLNNNVNNKNRLMSSSSNDSSREEWVQRRSDGQREPMNLTP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00604 260 CDD PMEI-like_3 15 180 - -
Aip06g00604 260 MobiDBLite consensus disorder prediction 223 260 - -
Aip06g00604 260 SMART PMEI_2 7 174 IPR006501 GO:0004857
Aip06g00604 260 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 178 IPR006501 GO:0004857
Aip06g00604 260 MobiDBLite consensus disorder prediction 223 240 - -
Aip06g00604 260 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 173 - -
Aip06g00604 260 Pfam Plant invertase/pectin methylesterase inhibitor 12 174 IPR006501 GO:0004857
Aip06g00604 260 Gene3D Invertase/pectin methylesterase inhibitor family protein 8 180 IPR035513 -
Aip06g00604 260 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 178 IPR035513 -
Aip06g00604 260 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 4 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00604 Aip-Chr6 7930383 7932681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00604 12 187 Carbohydrate Esterase AT3G14310 33.708 3.55e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00604 - - adu:107492431 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00604 06 7930383 7932681 Aip06g00604 06 7930383 7932681 ECH