Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00580 ATGCCGGTAGAAGAAGATCATGATGTTGTAGTTGTGGATGTGGAGAAAATTGAAAACAGTAATGAAGAGACGGAACAACAAGAAGCTTCTGATGTGATGGAGAAGAAGCAGCTTTCTTCGAAAATCTTGCGAAGATATGACTCTCTGGAACTGGCATCTCAAAGATTCTCCGGCACGCATGCCGCAAAAGGGCCATCTATGTGTTTGATACTTCAACTTGCGTTCCAAAGTATTGGGATAGTGTACGGTGATATTGGAACATCACCATTGTATGTGTATTCAAGCACATTCACTGATGGTATCAAGAACAACGATGACATCTTGGGAGTTCTTTCCTTGATCTTGTATACCATTACTCTCATCCCTCTCATTAAGTATGTCTTTGTGGTCTTAAAGGCCAACGATAATGGCGACGGAGGGACTTTTGCTCTATACTCTCTAATATGTCGTTATGCAAAAGTGGGACTTATTCCGAATCAACAAGTGGAGGATGCTGACGTGTCGAACTACCAGCTTGAGTTGCCAAATAACCGTCAGAAGAGAGCAAGCAAGCTTAAGTGTGCGCTTGAGAAAAGTCACTTCATGAAGCTGTTCCTCTTATTTGCTACCATGCTTGGCACTTCCATGGTCATTGGTGATGGTGTTCTCACCCCTTGCATCTCTGTTTTATCTGCTGTTGGAGGGATCAAGCAAGCAGCTACTAACATCAACAACGATGTGGTTGTTCTGATATCCGTGGCAATCTTGGTTTGCCTTTTCATGGCTCAGAGATTTGGAACTGATAAAGTTGGATACACCTTTGCTCCTATTATCTGTATATGGTTTGCCTTCATCGCAGGCATTGGTCTCTACAATTTCATCAAGTATGATCCCTCTGTTATTAAAGCAGTAAATCCAAAATACATAGTTGACTACTTCATTAGGAACAAGAAAGATGCTTGGATTTCTCTTGGTGGTGTTGTGCTCgccataactgGAACTGAAGCACTATTTGCTGATGTTGGACATTTCACAGTTCCATCCGTACAAATTAGCATGTGTTCTGTGACTTACCCTGCTCTGATTTTGGCTTATGTTGGACAAGCCTCTTTCCTTCGCAAGCATAATGATCTTGTTAGTGACACATTCTACAAGTCCATACCAGGCAAACTATATTGGCCAATGTTTGTTATTGCTGTTATGGCAGCAATTATAGCTTCACAAGCCATGATCTCAGGAACTTTCTCCATAATCCAACAATCCTTGTCATTGGGATGTTTCCCTCGTGTGCAAATTGTACATACATCGAGCAAGCACGAAGGACAAGTTTATATTCCAGAAATCAATTACATCCTTATGATTGCATGTATTGCCATCACTGTTGGATTTAAAACCACTACAAAAATTGGCAATGCCTATGGGATAGCAGTGGTGTTTGTAATGACACTTACATCTGCTTTTCTAGTACTAATCATGATCATGATATGGAAGACTCATATACTTTTGATCATTAGCTATGTGCTAATCATTGGTTCTGTGGAAGTTGTTTATCTAAGCTCAGTCTTATACAAATTTGACCAAGGGGGGTATCTTCCCCTTGCATTCGCGGCGGTTCTAATGTTCATCATGTATGTTTGGAACAACGTGTACCGAAGGAAGTACTACTATGAATTGGATCACAAGATTTCTGCAGAGAAGGTTAAAGAGATTGCTTGCAACACAAGTTTGTGTAGATTACCCGGCTTAGCTATGTTCTATTCAGAGTTAGTTCAAGGTGTTCCTCCAATTTTCAAGCACTATGTGGCCAATGTACCTGCCTTGCACTCACTTCTTATCTTTGTTTCCATCAAGTNNNNNNTTTCGTCGCGTGCACCCCAAGGAACTCAATGTGTTCAGGTGTGTTGTGAGGTATGGATACACGGATGTGCGCAACGAGGAAGAGCCTTTTGA 1929 0.4095 MPVEEDHDVVVVDVEKIENSNEETEQQEASDVMEKKQLSSKILRRYDSLELASQRFSGTHAAKGPSMCLILQLAFQSIGIVYGDIGTSPLYVYSSTFTDGIKNNDDILGVLSLILYTITLIPLIKYVFVVLKANDNGDGGTFALYSLICRYAKVGLIPNQQVEDADVSNYQLELPNNRQKRASKLKCALEKSHFMKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQAATNINNDVVVLISVAILVCLFMAQRFGTDKVGYTFAPIICIWFAFIAGIGLYNFIKYDPSVIKAVNPKYIVDYFIRNKKDAWISLGGVVLAITGTEALFADVGHFTVPSVQISMCSVTYPALILAYVGQASFLRKHNDLVSDTFYKSIPGKLYWPMFVIAVMAAIIASQAMISGTFSIIQQSLSLGCFPRVQIVHTSSKHEGQVYIPEINYILMIACIAITVGFKTTTKIGNAYGIAVVFVMTLTSAFLVLIMIMIWKTHILLIISYVLIIGSVEVVYLSSVLYKFDQGGYLPLAFAAVLMFIMYVWNNVYRRKYYYELDHKISAEKVKEIACNTSLCRLPGLAMFYSELVQGVPPIFKHYVANVPALHSLLIFVSIKXXXSSRAPQGTQCVQVCCEVWIHGCAQRGRAF 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00580 642 Pfam K+ potassium transporter 74 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip06g00580 642 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 32 619 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip06g00580 642 TIGRFAM kup: potassium uptake protein 73 616 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip06g00580 642 PANTHER POTASSIUM TRANSPORTER 32 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00580 Aip-Chr6 7588419 7592350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00580 12 616 Inorganic Solute Cotransporters AT4G13420 57.355 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00580 K03549 - csin:114286317 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00580 06 7588419 7592350 Aip06g00580 06 7588419 7592350 ECH