Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00576 ATGGACTTCCCGAACGACGATTTCCTTGAGCTGCCGATTGGGAACTCCGCCGAGTCGTTGCAGAGGTTCTTGGCTTCGCAGAGAGACCTCTTCCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTCTTTCAATAAAGATCGGTAAAAGACCAAGGGATTTATTAAATCCGAAGGCCGTTAATTACATGCAATCTGTTTTTTCTATTAAGGATGCAATTAGCAAGAAAGAATCTCGAGAGATTAGTGCTTTATTTGGTGTCACAGTAACACAGGTGCGTGACTTTTTCAATGGTCAACGGTCTAGAGTGAGGAGATTTGTTCTGTCGTCAAGGGAGAAAGCATTAAAATCTAATTCTTGTGAAGAACCTCATGATGAGCTAATAAACTCTGATCCTATGAGACCAATAAATCCAGCTCCCTTAAATTCTATCATGCCCAGCAATGCTGAAGGCGCATCTTGTTCAACGCAGGATGCAGCTTTGTCTGACCTAGATGACTTAGATAAGAAATTTGTTGATAATATTTTTAGTCTAATGGAGAAGGAGGAGTCATTTTCTGGGCAGGAGAAACTGATGGAGTGGATATTGACAATACAGAACTTTTCAGTGTTGTTGTGGTTTCTGACCAGAGGAGGTGTGATGATTTTAGCAACTTGGTTGAGTGTAGCAGCTGTTGAAGAGCAAACAAGTGTCCTCCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACACAAAGCCCTTCCTACACACATATCAGCTATATTGCCGTGTGTTAATAGATTGCGGTTCTACAGGACATCAGATATATCAAACAGGGCAAGGGTTTTGTTATCGAAGTGGAGCAAATTATTAGCAAGGGACCAAGCAATGAAGAAACCCAATGGCTTTAAACTTTCTAATGATGGTCAAAAAGATAAAATGTTCTCTGAGAGTATTGGTCAAATTATGGGCTCTGAATCATGGGATTCAAATATGAATGTCCATGAAGACATTCTTGCTCTCTCTAATGATCATTCAGATAATTTCAGGAAACTGGAATCTTCCCAAGCTGTGAAATTGTTGCCATCCAGCTCAGATGATTCTAATAAGAAGCTTGCTCTTGGTGTATCTTCATCTCAATCAAATGGCCCTAGAGAGCGCAGAAAAGTGCAACTGGTGGAACAGCCAGGCCAAAAATCAGTGACCAGAAGCCCACAGGCGACAAGAGTAGCCCCTATAAATCAAGGTCGTCCTATGTCTGCTGATGATATACAGAAAGCGAAAATGCGTGCTTTATTCATGCAGAGTAAGTATGCAAAAAATGGGTCTTCCAAGGAAAATAAAAATGTGAAGATCGATGGTTTGCATAAGCATCAGACGAATCAGGCCAGTATTGCAGCTTGCTCTGCTAAAGTTCCTGTTCCACCCAGAATTGAAGATGATAAAAGGACCTCATTGCTTCCCTCTAGTAAGGCCACTAATAGGCTGGAAACATCTTATTCTAAACCTAGAATGGATGCAAATGAACCAGTGTGGGAGAAGTGCAAGCGGGTGCAAATCCCATGGAAGACACCAGCAGAAGTGAAACTCAGAGATACATGGAGTGTTGGTGCTGGTGAAAATAGCAAAGAGGTTGATGTCCAGAAAAACAGAAACCGCAGGGAGAAGGAAACTATTTATCAGACTGTCCAAGAGATACCATCTAATCCCAAAGAGCCATGGGACCTCGAGATGGACTATGATGACACTTTGACACTGGAAATTCCCATTGAACAGCTGCCGGATGTTGATGGTGCAGAACTAGCATTTGCCCCTGATGAGGTTGCAACTCATGCTGTTCAAGGGGTAGCCACACCGTCTTCAACCAGTAATGTAGCTGATACTGCTCAACCTGACTTGGAACTGCTAGCAGTGTTACTTAAAAATCCAGACTTAGTATTTGCCTTAACTTCGGGACAAGGTGGTAGCATCCCAAGTGAGGAAACCGTGAAGGTACTTGACATGATCAAGAGAGGTGATATGAACTTGGGTACACATGATACAAATAATGGAAATGGCATTAGTGCAAAGCCCACAGAGATGGTGGAAGTTTCACTCCCCTCACCAACTCCTTCAAGTGATCCAAGAACGAGTGGATGGAGCACAATGCCACCAAAGAATCCTTTTTCACGGCAAAGCTTAGCACCAGCTAGAAGCTATCCTGCAGTGGCAACTACCAACTTAATATCTCAGGTTCCAGCAATCGGCACTACAGTAATAAGGCAGCAGCCAACAATGGCGCTTCCATCTTCAAATCCCTTCACTAGCACAGTAGTTTCTTCATATTCACTGCCTCAGGCAACTATTGTACCTGAGACAGAGATGCAACCACCCCTCTCTCTTTCCTCTCTGCATGTACAACAAACACCACTCTCAGATATAGGTTTAACCATGAAGAACAAAACAAGTACAAATCCGTCTTCAGTTAACTTACCCGGCGCACATTCACCTTTAGCGATGCGGGTCAACGGCACCAGTAATGTAAAACCAGTACCTAATATGAGTGTTGAAGACGGTTTGTCTAATTCATTTCCGCAATCCTTCAGGTTGGCCTCAACAACCCCTTCACTTTCAGCCACACAACAACAACAAAGACATGCACACTTGGCCTCTCAGCAAGCCCATTTCCCTGAGCCTTCATACCGCAACAGTGTACATTCCTATCCACCACCACAAATTGAAAAACCAGGTCAAGTTTCAGATTCTTGGAGAGTTAGGCAAGATGTGCCATCATCCAGTTACCATTCCAATAGAAATCAAAACTACTATGACAATGCATATGTTGGGGGTTCCATGCAGGCTGGTCCTTCTTGGGATAGAAACAATCATGCAACAAGGGAACAATATGAAACATGGAGCCCAGATAATAGTCCAACTAGAAATCCTAGGTATGTTCCTGGTAGGAGTTACCCAGAGTCCAGAGTGAATCAGCATGGAAGAAACCATAGGCCTGATTGGTCAAGGCAGCGTGGTTCTTCTGGACATTGGGACCCTGCTAGGCAGGGAAACAGAAAGTGGCATGACGAGAGACGATGA 3117 0.4366 MDFPNDDFLELPIGNSAESLQRFLASQRDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFNGQRSRVRRFVLSSREKALKSNSCEEPHDELINSDPMRPINPAPLNSIMPSNAEGASCSTQDAALSDLDDLDKKFVDNIFSLMEKEESFSGQEKLMEWILTIQNFSVLLWFLTRGGVMILATWLSVAAVEEQTSVLLLILKVLCHLPLHKALPTHISAILPCVNRLRFYRTSDISNRARVLLSKWSKLLARDQAMKKPNGFKLSNDGQKDKMFSESIGQIMGSESWDSNMNVHEDILALSNDHSDNFRKLESSQAVKLLPSSSDDSNKKLALGVSSSQSNGPRERRKVQLVEQPGQKSVTRSPQATRVAPINQGRPMSADDIQKAKMRALFMQSKYAKNGSSKENKNVKIDGLHKHQTNQASIAACSAKVPVPPRIEDDKRTSLLPSSKATNRLETSYSKPRMDANEPVWEKCKRVQIPWKTPAEVKLRDTWSVGAGENSKEVDVQKNRNRREKETIYQTVQEIPSNPKEPWDLEMDYDDTLTLEIPIEQLPDVDGAELAFAPDEVATHAVQGVATPSSTSNVADTAQPDLELLAVLLKNPDLVFALTSGQGGSIPSEETVKVLDMIKRGDMNLGTHDTNNGNGISAKPTEMVEVSLPSPTPSSDPRTSGWSTMPPKNPFSRQSLAPARSYPAVATTNLISQVPAIGTTVIRQQPTMALPSSNPFTSTVVSSYSLPQATIVPETEMQPPLSLSSLHVQQTPLSDIGLTMKNKTSTNPSSVNLPGAHSPLAMRVNGTSNVKPVPNMSVEDGLSNSFPQSFRLASTTPSLSATQQQQRHAHLASQQAHFPEPSYRNSVHSYPPPQIEKPGQVSDSWRVRQDVPSSSYHSNRNQNYYDNAYVGGSMQAGPSWDRNNHATREQYETWSPDNSPTRNPRYVPGRSYPESRVNQHGRNHRPDWSRQRGSSGHWDPARQGNRKWHDERR 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00576 1038 MobiDBLite consensus disorder prediction 374 400 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 858 907 - -
Aip06g00576 1038 SUPERFAMILY Homeodomain-like 68 132 IPR009057 -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 712 741 - -
Aip06g00576 1038 Coils Coil 1036 1038 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 974 990 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 858 947 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 501 515 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 374 421 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 931 947 - -
Aip06g00576 1038 SMART HOX_1 68 130 IPR001356 GO:0003677
Aip06g00576 1038 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 1 1038 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 974 1038 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 489 516 - -
Aip06g00576 1038 CDD homeodomain 69 125 IPR001356 GO:0003677
Aip06g00576 1038 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Aip06g00576 1038 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 1038 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 1002 1017 - -
Aip06g00576 1038 MobiDBLite consensus disorder prediction 710 741 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00576 521 739 Homeobox Transcription Factor Family AT4G02560 50.685 3.41e-46 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00576 - - adu:107492506 1970.28