Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00574 ATGGTGGAACAGAGGAAGCCTCTCGTTCTCTCTTCCACCAAACACCTCATCAATTCCTTGTTGAGCTCTTCCCCAAGCAACGACCCTGCAACCGCCACCGCCACCGCCACTACCACTCCCCTCTTCCAATTACCTGTGGGGATTCTCCGATTCTCCGACCACCCGAATCACCATCCCCAATTACCTTCTCTTGACGATTCTGCCCTTGTTGGCCTCTCCACTTTACTTCTTAAGAGGCTCTCTGTCACTTCTGGTTCACTGGTTCTGGTGAAGAATGCTGAGATGGGTGTGCAGAGGGTTGCTGTGGCCATTGCTCTTGATCCTCCAGGAACTACTACTACACTTGAGCCTGATTCTGATTTGAATTTATCATCATCTTCTTCTCATCCTGCCAGAGTAATGCTTGTGTTTCCTTCTTGTGATTTCCCTGCTAGTGGGGCCTTGTTGTTTGATCATGAAGTTGCTTATTTGTCTCCACTTTTAGCATTTAATCTAAATTTGCACATGTCATGCTTAAAATCCATTCTACAACATGGAGAGGACACTTTAGCTTCTTATTTCAAGCCCCAATTTTGTAATGAGGATGCTGCAAAAAGCAATGAGGATTATGTTATCAATGTTGAGTTGGCACCTTTTGCTCAAGCTCTTAGGTTTGCATCACATTTGAGGGTTTCTTTTGTGAAGATGCCAGAATGTGGCATCCTTGAATCTATCAGAGAAACTTCACCTATTGAATCTAAAGAACGGCAAGACATGATTGACTTAGCATTACAAAAGTACTTCGAAGTCGATAGATATTTGTCAAGAGGAGATGTTTTTGGGATTAACATAAACTGGAAATGCAATTCAACTATTTGCATTCCGTGCAACCAAAAATCAGATAAGAAAAATGACAGTAACCTTATCTACTTCAAGGTCATTGCTATGGAACCATCAGATGAACCGTTCCTTCGAGTCAATAAAACCTCAACTGCTCTGGTCCTAGGAGGGAGTTCACCATCCGCCCTTCCTCCAGATTTGTTAATTGCTGGACCAGAAGGACCTGTGCCATTGCAAGGAGACACAGTAAAGATATTGGGTTCAATACTTACACCAACTTTCTGTCCATCGGCCCTTTCTTCGAAGTTTAGAATTTCAGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAGAGAACTGTAGTTAGATATGTTGCTCGTCGACTGGGCTTGCATGTGGTGGAATATAACTGTCATGATCTAATGGTGTCTGAAAGAAAATCTATTGCTTTGGCTCAAGCTTTCAAGACAGCTCAAAGATACTCACCAGCAATACTTCTTCTACGGCATTTTGATGTTTTTCGAGATTCACCTTCTCCCGATGGTTCACTAAATGATCAAAGAGGCAATACATCTGAAGTAGCATCTGTTATCAGGAGATTCACTGAACCAATTAGTGAACATGATAGCAACTCCAGGGGAAAATCAAATGGTGAATTTGTTGAGAAGAATGTTGAGAAAACAAGCGTGCATCAAATCCTCTTGATTGCTGCTGCCGACAGCTCAGAAGGTCTACCTCCAACTATCAGACGCTGCTTTAGCCATGAAATAAGTATGGGACCTTTGACTGAAGAGCAAAGGACTGAAATGTTATCCCACTCACTTCAAAATGTTTCTGGACTCCTCTCTGATCCTGATTTGGAGGGTTTTGTAAAAGAAATAGTTGGTCAAACATCTGGTTTTATGCCCAGGGATATGTGTGCTCTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGGAACGATACTGAAGTGGACAAACATAGGTTTGAGGATATAGATGCTTCTTCTAGTTCCAAAGTGACACAGGAGAAGGAGAAAGTTTCACCTCAAATTCCTAGGAAGGAAGATTTGATGAATGCTTTAGAACGATCAAAGAAAAGAAATGCATCAGCATTGGGCACTCCAAAAGTTCCCAATGTGAAATGGGAAGATGTCGGTGGGCTTGAAGAAGTCAAAAAATCAATCCTGGATACTGTTCAGTTGCCCCTCCTGCATAAAGATCTTTTTGCATCTGGATTACGCAAGAGATCCGGCGTTCTTCTGTACGGTCCTCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACTGAATGTTCTTTAAATTTTCTTAGTGTAAAAGGTCCTGAACTGATAAACATGTACATCGGAGAGTCTGAGAAGAATGTTAGAGACATTTTCCAGAAGGCCAGATCAGCACGCCCATGTGTTATCTTCTTCGATGAGCTTGATTCTCTCGCCCCAGCTCGGGGTGCTTCTGGAGATTCTGGGGGCGTTATGGACAGGGTGGTTTCTCAGATGCTAGCCGAGATCGATGGCTTAAGTGATTCGACACAGGATCTGTTTATTATTGGTGCAAGTAATAGACCGGATTTGATAGATCCGGCACTTCTACGTCCCGGTAGATTCGATAAGCTTCTATATGTTGGAGTTAACTCCGATGCGTCTTATAGGGAGCGGGTCTTGAAAGCACAAACTCGAAAGTTCAAGTTGCATGAAGATGTTTCACTGTACTCTATAGCGAAAAAATGTCCGCCGAACTTCACCGGAGCTGACATGTATGCATTGTGTGCAGACGCCTGGTTCCATGCAGCGAAGCGCAAGGTTTCGAGCACAAATCCGGAGTCTTCCAGCCAAGATAGTGAAGCAGATTCTGTAGTTGTTGAATACAGTGATTTTGTCCAGGTCTTAGTAGAGCTGTCTCCTTCCCTCTCCATGGCTGAGCTTCAGAAGTATGAGAAACTTAGAGATCAGTTTGAGGGCACCTCAAAATAA 2817 0.4324 MVEQRKPLVLSSTKHLINSLLSSSPSNDPATATATATTTPLFQLPVGILRFSDHPNHHPQLPSLDDSALVGLSTLLLKRLSVTSGSLVLVKNAEMGVQRVAVAIALDPPGTTTTLEPDSDLNLSSSSSHPARVMLVFPSCDFPASGALLFDHEVAYLSPLLAFNLNLHMSCLKSILQHGEDTLASYFKPQFCNEDAAKSNEDYVINVELAPFAQALRFASHLRVSFVKMPECGILESIRETSPIESKERQDMIDLALQKYFEVDRYLSRGDVFGININWKCNSTICIPCNQKSDKKNDSNLIYFKVIAMEPSDEPFLRVNKTSTALVLGGSSPSALPPDLLIAGPEGPVPLQGDTVKILGSILTPTFCPSALSSKFRISVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDLMVSERKSIALAQAFKTAQRYSPAILLLRHFDVFRDSPSPDGSLNDQRGNTSEVASVIRRFTEPISEHDSNSRGKSNGEFVEKNVEKTSVHQILLIAAADSSEGLPPTIRRCFSHEISMGPLTEEQRTEMLSHSLQNVSGLLSDPDLEGFVKEIVGQTSGFMPRDMCALIADAGANLFPRNDTEVDKHRFEDIDASSSSKVTQEKEKVSPQIPRKEDLMNALERSKKRNASALGTPKVPNVKWEDVGGLEEVKKSILDTVQLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKAQTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVSSTNPESSSQDSEADSVVVEYSDFVQVLVELSPSLSMAELQKYEKLRDQFEGTSK 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00574 938 Gene3D - 355 553 IPR027417 -
Aip06g00574 938 PANTHER PEROXISOME ASSEMBLY FACTOR 2 40 934 - -
Aip06g00574 938 SMART AAA_5 376 535 IPR003593 -
Aip06g00574 938 SMART AAA_5 688 828 IPR003593 -
Aip06g00574 938 CDD AAA 379 440 - -
Aip06g00574 938 Gene3D - 650 927 IPR027417 -
Aip06g00574 938 Pfam ATPase family associated with various cellular activities (AAA) 380 530 IPR003959 GO:0005524|GO:0016887
Aip06g00574 938 Pfam ATPase family associated with various cellular activities (AAA) 692 824 IPR003959 GO:0005524|GO:0016887
Aip06g00574 938 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 601 IPR027417 -
Aip06g00574 938 ProSitePatterns AAA-protein family signature. 795 813 IPR003960 GO:0005524|GO:0016887
Aip06g00574 938 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 932 IPR027417 -
Aip06g00574 938 Gene3D - 826 912 - -
Aip06g00574 938 PANTHER AAA-FAMILY ATPASE 40 934 - -
Aip06g00574 938 CDD AAA 659 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00574 Aip-Chr6 7507822 7513468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00574 658 891 Calmodulin-binding Proteins AT3G56690 38.298 7.95e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00574 K13339 - gmx:100820183 1417.91