Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00540 ATGAAGACAACATCTTTCCTCGTAGCTTGTGTGTTACTGTCTTGTTTCCTTGGGGCTTGCCACGGAGGCGACCTTAGGAAAAATTTCTATAGAAATTCCTGTCCTCAAGCTGAAGCTATTGTTAAGACCAAAATCCAACAACACGTTGCTGCAAGGCCTGAATTGCCAGCCAAATTGATTAGGATGCATTTTCATGACTGTTTCGTCAGGGGTTGTGACGGAGACGCTTTTTCTGTCCGATTTAATAATGTGCCTCTGTGGGAAGTGCTTACTGGTAGAAGAGATGGGAGAGTGTCCACAGCAAGTGAAGCCTTGGCCAATCTCCCACCACCTTTCTTCAACTTCACCCAGCTCAAACAAAGCTTCGAAAGTAAAAAACTCACCGTGCATGATCTCGTTGTATTATCAGGTGCACACACAATTGGAGTAGGGCATTGCAATCTCTTCAGCAATAGGCTTTTCAATTTCACTGGAAAAGGTGATCAAGATCCTTCACTAAACCCCACATATGCTGACTTCTTGAAGACAAAATGCCAGGCACTAAGTGACACAACCACAACGGTGGAGTTGGATCCTAATGGCTCCACCAAATTTGACAATGACTATTATAACATCCTTGTACAGAACAAGGGTCTGTTCCAATCAGATGCTGCGCTTCTAACAACAAAGACATCAAGGAACATTGTCAATGAATTGCGTAACCAAAACAAGTTCTACACGGAGTTTGGACAATCAATGCAGAGAATGGGAGCCATTGAAGTCCTCACTGGCTCTGCTGGGGAAATTAGGCATAAGTGTTCTGTTGTCAACTCCAATTAA 819 0.4359 MKTTSFLVACVLLSCFLGACHGGDLRKNFYRNSCPQAEAIVKTKIQQHVAARPELPAKLIRMHFHDCFVRGCDGDAFSVRFNNVPLWEVLTGRRDGRVSTASEALANLPPPFFNFTQLKQSFESKKLTVHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPSLNPTYADFLKTKCQALSDTTTTVELDPNGSTKFDNDYYNILVQNKGLFQSDAALLTTKTSRNIVNELRNQNKFYTEFGQSMQRMGAIEVLTGSAGEIRHKCSVVNSN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00540 272 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Aip06g00540 272 Pfam Peroxidase 78 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 Pfam Peroxidase 41 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 Gene3D Peroxidase, domain 2 109 249 - -
Aip06g00540 272 PRINTS Plant peroxidase signature 83 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 PRINTS Plant peroxidase signature 205 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 PRINTS Plant peroxidase signature 130 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 PRINTS Plant peroxidase signature 244 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 PRINTS Plant peroxidase signature 6 26 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 PRINTS Plant peroxidase signature 189 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 ProSitePatterns Peroxidases proximal heme-ligand signature. 131 141 IPR019793 -
Aip06g00540 272 PANTHER PEROXIDASE 10 75 - -
Aip06g00540 272 PANTHER PEROXIDASE 79 269 - -
Aip06g00540 272 CDD secretory_peroxidase 25 269 IPR033905 GO:0004601|GO:0042744
Aip06g00540 272 ProSiteProfiles Plant heme peroxidase family profile. 24 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 Gene3D - 78 270 - -
Aip06g00540 272 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 PRINTS Haem peroxidase superfamily signature 131 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 Gene3D - 25 77 - -
Aip06g00540 272 PANTHER PEROXIDASE 25-RELATED 10 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 PANTHER PEROXIDASE 25-RELATED 79 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip06g00540 272 SUPERFAMILY Heme-dependent peroxidases 25 270 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00540 Aip-Chr6 6933192 6934627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00540 7 271 Peroxidase AT1G05260 43.963 2.88e-86 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00540 K00430 - gsj:114405310 426.017