Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00531 ATGTCTCTCTCTGTCTCGCGCCATCCATCCTCGCCGTTCACAGCCTCGTCGAGTCATCGTGTCACCAGATCTAAAACCTACATATTTTTGTTCTTGAATCCTCTTCAAGGTTCGAATTTGAGTCCTGCTTCTGAGGTTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGACATTGGCCGCATTGCCTCCATTGAAAATAACCACACGCCAGTTGATTATGCAAAGAAAGGGCTGAAAGGAGCTATTAAGAATGTTGAAGTATTCATGGACGCATTTAGAGCAGTAATTGAAGAGAGGATTAAAAACAAATGTCATGTTTTCTTGTCCCAGTATCTTCTTTTCTCAATTTGGCTACGCAGGTTGGTTGCATAA 378 0.4206 MSLSVSRHPSSPFTASSSHRVTRSKTYIFLFLNPLQGSNLSPASEVGTPICIPSRDFIDIGRIASIENNHTPVDYAKKGLKGAIKNVEVFMDAFRAVIEERIKNKCHVFLSQYLLFSIWLRRLVA 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00531 125 Gene3D Translation factors 36 109 - -
Aip06g00531 125 PANTHER PHOTOSYSTEM II PROTEIN D1 44 87 - -
Aip06g00531 125 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 44 87 IPR015760 -
Aip06g00531 125 SUPERFAMILY Translation proteins 46 84 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00531 Aip-Chr6 6812580 6815609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00531 45 87 Eukaryotic Initiation Factors Gene Family AT1G76810 79.070 4.01e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00531 K03243 - fve:101298848 77.0257