Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00530 ATGTCTCTCCGTCACCAAGTTGCTTCTTCTCTCCGTCGCACCAGCTTCTTCCGCCGCCGCTCGCGTCACAGGATCTCTCTCTGTCATCCCTCGCGTCACACGGGCTCCCTCCGCCGCCGCTCTCGTCGCGTCTGGAGCGATTCGGTTGCAGAGATCTTCAATCTTTTGATCTATTGGCACTCCACTAACCAGATGACTGTAGTTGAGGCATATATTGGAAGGAACAAATTACATCCACCAGATGACTCATCAAAGTTAAATCCGGAAGTTTTATCCTTGATAAACGAGGGCATTGCCCAGAATACTACTGGAAATGTTTTTGTGCCTAAGGAAGGGGGAGAGGCAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTAAAATTGGGTATGAATTTCAGTCTTCTCAGATCAAATACGATAGTTCTCCATGTCTTCCCCTTTAATTCCGAGAAAAAAAGAGGAGGGCTCTGGAGTACATACACATTGGAAAGGAGGGCTCTTGATCACGAGGGATTTGTTGCTGAGGGGCCTAATATGAATGTGGCTTTTGTGACTAAAGAGAAGGAGCTTATAATGCCCCACTTCGATAAAATTCTTAGTGGCTGCACAGCTAAGAGGGTTTTGACGCTTGCTGAGAAGTTGTTGAGCAAGGGTAAGCTTCGTGGGATAAGGATGAAACATGTGACTGTTGAGGAAGGAAAGAGTTCCGCTGAAATGATGCTTATTGGCAGTGGCGTTCTTGTTTGCCCTGTAGTGCAGTGGGACGAGCAAGTTATTGGAGATGGCAGATATTGTAGTAAAGGCATAAATATAATTCACCATAAATTTGTTCTTTGCATAGAAGAGAATATAGGTGAGCTGGTGCATCCGCATTGTGCTTTTTTACTTCCTTTCTTCCTTTCATCTTGTATCACTGGGGATAGGCAGAGGATAAGGACTAAAAATTGGAGACAGCCATATCCTGAGTCACTGTCTTAA 993 0.4522 MSLRHQVASSLRRTSFFRRRSRHRISLCHPSRHTGSLRRRSRRVWSDSVAEIFNLLIYWHSTNQMTVVEAYIGRNKLHPPDDSSKLNPEVLSLINEGIAQNTTGNVFVPKEGGEAEISGSPTEKAILSWAVKLGMNFSLLRSNTIVLHVFPFNSEKKRGGLWSTYTLERRALDHEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEKLLSKGKLRGIRMKHVTVEEGKSSAEMMLIGSGVLVCPVVQWDEQVIGDGRYCSKGINIIHHKFVLCIEENIGELVHPHCAFLLPFFLSSCITGDRQRIRTKNWRQPYPESLS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00530 330 Pfam Amino-transferase class IV 172 258 IPR001544 GO:0003824
Aip06g00530 330 Pfam Cation transport ATPase (P-type) 110 159 - -
Aip06g00530 330 PANTHER CATION TRANSPORTING ATPASE 62 161 - -
Aip06g00530 330 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 172 268 IPR036038 GO:0003824
Aip06g00530 330 Gene3D - 170 277 IPR043132 -
Aip06g00530 330 Gene3D - 63 169 IPR023299 GO:0000166
Aip06g00530 330 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 62 161 - -
Aip06g00530 330 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 62 220 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00530 Aip-Chr6 6792970 6796885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00530 63 161 Primary Pumps ATPases AT3G21180 65.657 1.27e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00530 K18482 K01537 ahf:112756342 401.749