Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00527 ATGGACAAGGACAAGCCTTTTGTTCATGGTGGAGGTCTTCCACCTCCATCAGGACGTTATTTGGGTTACTCACCCACTGAAAATGCCTTCAATGTGAAATCCGAGCCGTCTTCTTCGTCGTCATATCCTCCAATGGTTCCAGGTTCTAGCCCAGACTCCAGTCACTTTGAGATTCTAACCCTACCCGATGATATCAGCTTCGACAGTGACCTTGGTGTTGTTGGAGGCGCCGATGTGGCGTCGTTTTCTGATGACACAGAGGAGGACTTACTTTCAATGTACCTCGATATAGATAAATTCAATTCGTCATCTACATCAACATTTCAGATGGGTGAGCCATCTAATGCTGCTGCAGCTTCAGGTTTGGCAACTCACATCAGGTCCTGCATCAGGAGGGCCTACCTCTTCTGCAGAGAACAGTGTCCTTGGATTTGGGCAATAGGCAGTGCAAGATCAAAAGAGAGGAAGATGCGCTACATTGTTGAATGTGAAAGGAAGGTGCAGACATTGCAAACTGAAGCAACATCTTTGTCTGCACAGTTAACTCTATTGCAGGGCAGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAAGTCTTGGCAACTCAGGAAGAAAAAGATGGGGAAGTAACCAAGGTTTTACAGCATTACACATCGGAAAAACTATCATGCTTTGGAGAGCTTGCTCTAATGTCATTCAAGTTTACTCAAGTTCACATATTCGTTGAGGACTATAATCCATTCAGGGACATGAAGTTAATCAAACATAGCCAATTTTATATGATTTTTCCTTCACGGTACAATAAACCACTCCAGGCTTCTAGCTTACACGAAGAAGATGAGAAATTAATTGATAAATTATCAGAGAAAAAGTCTTTGCTGAGGAACCTCCATGATGTTGGCAAAGAAATGCAAGTAAACAACGAGAGTGGTGCCGTGAGCTGA 954 0.4319 MDKDKPFVHGGGLPPPSGRYLGYSPTENAFNVKSEPSSSSSYPPMVPGSSPDSSHFEILTLPDDISFDSDLGVVGGADVASFSDDTEEDLLSMYLDIDKFNSSSTSTFQMGEPSNAAAASGLATHIRSCIRRAYLFCREQCPWIWAIGSARSKERKMRYIVECERKVQTLQTEATSLSAQLTLLQGSEGDCFYVVGSGEFEVLATQEEKDGEVTKVLQHYTSEKLSCFGELALMSFKFTQVHIFVEDYNPFRDMKLIKHSQFYMIFPSRYNKPLQASSLHEEDEKLIDKLSEKKSLLRNLHDVGKEMQVNNESGAVS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00527 317 ProSiteProfiles cAMP/cGMP binding motif profile. 183 234 IPR000595 -
Aip06g00527 317 MobiDBLite consensus disorder prediction 1 51 - -
Aip06g00527 317 MobiDBLite consensus disorder prediction 27 51 - -
Aip06g00527 317 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 50 - -
Aip06g00527 317 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 54 123 - -
Aip06g00527 317 Coils Coil 160 180 - -
Aip06g00527 317 SUPERFAMILY cAMP-binding domain-like 184 235 IPR018490 -
Aip06g00527 317 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 50 - -
Aip06g00527 317 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 144 186 - -
Aip06g00527 317 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 54 123 - -
Aip06g00527 317 CDD bZIP_plant_RF2 150 185 IPR044759 GO:0003700|GO:0006355
Aip06g00527 317 Gene3D Jelly Rolls 167 258 IPR014710 -
Aip06g00527 317 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 144 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00527 Aip-Chr6 6769331 6775261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00527 19 185 bZIP Transcription Factor Family AT1G06070 44.262 3.90e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00527 - - pop:18106892 175.252