Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00514 ATGCACACAGTTGGAACATCGACATGGATAAATATTGAGGTAGATTATCCCAATCATTTGATATATGTGTTCGAACATCCTACTTGTTTTAATGGGGCACTTCATTGGATTGGTAGAGATGTTGATAGAAATGCCACAGTATGGACTTTTAATTTTGACACCGAGCAGTTCCAATTCTTCTCTAACACGCCCAGGGGTCAAGGTAAAGACTGCATAGTAGATTTCAAGGATTCTCTTTGTTTCATGTATTTTAATGAGTTGCTTGTCTCAATGTGGATGATGGAAAGATATAGAGTTGGAGAATCTTGGACTCCCATTTTTCAGTATTCCATAACCACATCTCAATTACCTAGCTGCATTGCCTACCATGATAGTGAAAATCAAGAGTTTTGGATTTTTGGGACTCCTTGGCATGATATCAAAATTCATGGCAAGTTTCAAATGGGCAAAACTCGCGTTGAAAATGTGACTTCTCCGTCGCTTCTGCTTTGTCGCCGCTCGCTTGCACGAGCTCCCTCCGTCACTGCTCGCTTGCACGAGCTCCCTCCGCCGCCGCTCGCTCGCATGAGCTCCCTCCTCTGCTGCTCGCGTTACACGAGCTCCCTCTGCCGCCTCTCAGCTTATAGTTCTGCTTCTGAGGTTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGACATTGGCCGCATTGCCTCCATTGAAAATAACCACACGCCAGTTGATTATGCAAAGAAAGGGCTGAAAGGAGCTATTAAGAATGTTGAAGTATTCATGGACGCATTTAGAGCAGTAATTGAAGAGAGGATTAAAAACAAATGTCATGTTTTCTTGTCCCAGTATCTTCTTTTCTCAATTTGGCTACGCAAGATTCAAAAGAATACTGAATCTCAGTTATCCAAACACTTTCATACTGTATTATCTTTTGCTTTACATGAAGTAGTGAAGAACACCTGTGTCTCTGTGGATAAGTTTTTTGTTATGATTAAGGACCTTGATATATCAAGGAAGAAAGCAGATCTTGAAGGCCACACAACAAGAGCAGATGGTCTGAGAAAATCTTTGATGGACATCATTTTAGATCAACTAGCTTACAACATAGATACCATCCCCCTATTTCTTAAGACCTTCAGTGAACCAAAATGGAAACTGGAAATAGTTGTGCATTACCTGTGGAAATACATGACTAAGGTAATCAGCTTCCTAACCCTCATACATGGATTAGCCTCTACTTTGCTCTGCTTTAGAATTGTTCCTAGTCCTACTCCTAGAAATTGA 1278 0.4108 MHTVGTSTWINIEVDYPNHLIYVFEHPTCFNGALHWIGRDVDRNATVWTFNFDTEQFQFFSNTPRGQGKDCIVDFKDSLCFMYFNELLVSMWMMERYRVGESWTPIFQYSITTSQLPSCIAYHDSENQEFWIFGTPWHDIKIHGKFQMGKTRVENVTSPSLLLCRRSLARAPSVTARLHELPPPPLARMSSLLCCSRYTSSLCRLSAYSSASEVGTPICIPSRDFIDIGRIASIENNHTPVDYAKKGLKGAIKNVEVFMDAFRAVIEERIKNKCHVFLSQYLLFSIWLRKIQKNTESQLSKHFHTVLSFALHEVVKNTCVSVDKFFVMIKDLDISRKKADLEGHTTRADGLRKSLMDIILDQLAYNIDTIPLFLKTFSEPKWKLEIVVHYLWKYMTKVISFLTLIHGLASTLLCFRIVPSPTPRN 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00514 425 Gene3D Translation factors 208 316 - -
Aip06g00514 425 PANTHER NEGATIVE REGULATOR OF SYSTEMIC ACQUIRED RESISTANCE SNI1 291 397 IPR034561 GO:0005634|GO:0006974|GO:0030915|GO:0031348|GO:0045892
Aip06g00514 425 TIGRFAM F_box_assoc_1: F-box protein interaction domain 2 118 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00514 Aip-Chr6 6404041 6408809 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00514 213 255 Eukaryotic Initiation Factors Gene Family AT1G76810 79.070 1.67e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00514 - - aip:107646327 265.388