Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00504 ATGGTTTCGTCTCGTATGGTTTCTTTCTTGGTCCTGCAAATGGAGATTTATTCTATGGTCTATTCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTTCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAATTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGAATCAGACTATTTCGTGAACAGTCATCAAAGGCACCTGATGTATCAAAGCTAGTTTTCGGAAGCAAATTGCCTATTCTAAGTGATGAAAAACTATCATTGAAGGTATTGCTTTTCGAGGCAAAAAAACGAGAGCGGGCCTTTACGAATAGAGGACGTCGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCAGTCGCAGATGTTAGAAAGGAAGAGAGAGATCTAAATCCACCTATTAATGTGGAGTTGGTGATATTGGAGAAAGAGGATGTTAAGGAAGGTTTTGGCATTGGAATATTAGAAGGAGTGTTTACCGCAATTTGGAATCGTCATGGAAGGATTTCGGAGGATCAAGCCACATGGGACAAGCGGGAGGAGAGAGGGACGATAAGAGGGACGGAACTCGGCTATGGAGGAAGAGTGGTCACTCAATGCAGCGTCGGCGTGAGCAGAAAGAGGGGGATGAGAGAGAGGGAACTTGACGAGGAAGAAGAGTCCTCGTA 779 0.4467 MVSSRMVSFLVLQMEIYSMVYSDFGLAREISSQPPYTEYVSTRWYRASEVLLQSYLYSSKVDMWAMGAIMAELFSLRPLFPGARIRLFREQSSKAPDVSKLVFGSKLPILSDEKLSLKVLLFEAKKRERAFTNRGRRNQLRSMGEAKNLLQYMFNSVADVRKEERDLNPPINVELVILEKEDVKEGFGIGILEGVFTAIWNRHGRISEDQATWDKREERGTIRGTELGYGGRVVTQCSVGVSRKRGMRERELDEEEESS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00504 259 Gene3D Transferase(Phosphotransferase) domain 1 22 84 - -
Aip06g00504 259 SUPERFAMILY Protein kinase-like (PK-like) 22 94 IPR011009 -
Aip06g00504 259 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 22 83 - -
Aip06g00504 259 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 83 - -
Aip06g00504 259 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00504 259 Pfam Protein kinase domain 22 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00504 Aip-Chr6 6282339 6288616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00504 22 127 MAP Kinase Gene Family AT4G11330 34.091 7.32e-17 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip06g00504 Pkinase 2e-16 CL0016