Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00488 ATGAACCCGCTTGCAAGGAGTCTGGAGGAGTTGCTGCCCCATAGAATTTCAAGTACCACTTGGTCTTTCATGCTCCTCAGAACAATATTGGTTTTGGCTACACTTTTAGCTGCTTTTCTAATTCCTTTTTTCGGACTTGTGATGGCTTTAATTGGTTCTCTCCTCAGTACACTTGTGGCCTTGATATTGCCAGCTTTATGTTTTCTGAGAATTGTGGGGAAAAGAGCAACAAGTACACAGGTTACGTTAAGCATCATAATAGCTGCAATTGGAATCGCCAGTGCTTCCCTTGGAACATATTCAGCTTTGTTGAAAATTATTCAGAGTTACTGA 333 0.4114 MNPLARSLEELLPHRISSTTWSFMLLRTILVLATLLAAFLIPFFGLVMALIGSLLSTLVALILPALCFLRIVGKRATSTQVTLSIIIAAIGIASASLGTYSALLKIIQSY 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00488 110 PANTHER BNAC04G01690D PROTEIN 1 108 - -
Aip06g00488 110 PANTHER OS05G0424000 PROTEIN-RELATED 1 108 - -
Aip06g00488 110 Pfam Transmembrane amino acid transporter protein 13 101 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00488 Aip-Chr6 5938476 5940500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00488 3 106 Amino Acid or Auxin Permease AAAP Family AT5G02180 45.192 1.47e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00488 K15015 - mtr:MTR_7g089905 145.591