Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00487 ATGGTGAGAGGCTCTCGATCTCAGATTTCGTTGAATTATGATGGTAACGAAGACGAAGACATTGAAACCGTCAACTACGACAGTGGTAGTGACAATGAAGATAAGCTAGATCCGCCTGAGTCTTTCTCTTCTCGCCAATGGCCTCAAAGTTACAAAGAAGCAACTGATTCTTACTCAATTGCTGCAGCTCCGAGTCTTGGATCATTTCTTCGAGGACCGAGTGTTATCTATTCAAGCTTCGTCAACAAGTCAAAGAGTTATTTAGAACTAGATGCAAAGGCTTCTTTTCTGTCTGGTCTGGGATATGGTGGTAGTGTGCATCAAGATGGGATCACAAGACAATCAACATGGTGGGAGAAAGCTTCAATTCAAATGCAAATTCCTGAAGAATTACCCCTTGGTTATGGATGCAACCTCACTCAAACAATTTTCAATGGGATTAATGTTATGGCTGGAGTTAGCCTTCTGTCTTCACCTTTAACGGTGATGCAAGCAGGGTGGGCCAGCTTGCTGGTGATGCTTCTTTTTGCTGTTATGTGTTTATATACAGCGGACCTTATGAGACACTGCTTTGAAAGCAGAGAAGGGATTGTCAGCTACCCAGATATAGGAGAAGCCGCATTCGGGAGATATGGCCGTCTTATTGTATCGATCATCTTGTACATTGAATTATTTTCATATTGTGTGGAATTTATCATCATGGAAGGAGATAACCTTACAGGGCTGTTTCCTGGATCATCGTTGGATATTGGAAGCCTCCACTTGGACTCCAAACATTTGTTTGGAATTTTGACTGCCCTTATCATTCTCCCTACTGTATGGTTAAAGGATCTTCGCATAATCTCTTATCTCTCAGCTGGAGGAGTAATTACTACAGTGGTGATTATTATCTGTGTGATTGTTGTTGGGACAACTAATGTTGGATTCCATCACACTGGCTCTTTCCTTCATTGGAGTGGCATTCCATTTGCATTTGGTATCTACGGGTTTGGCTTCGCAGGACACTCTGTTTTTCCGAATATTTACCAGTCTATGGCCAACAAACGAGAATTTAGCAAGGCAATCCTTATAGTTTTCATCTTATGTGTGCTTCTATATGGACTCGTCGCAATCCCCGGATATCTCATGTTTGGTGACGAGGTTTTGTCTCAGATAACATTGAACCTGCCTGCTAATGCATTTGCTTCCAAAATTGCCCTGTGGATAATAGTACTTAGCCCCTTCACCAAATATCCTTTTTTTTAG 1245 0.4185 MVRGSRSQISLNYDGNEDEDIETVNYDSGSDNEDKLDPPESFSSRQWPQSYKEATDSYSIAAAPSLGSFLRGPSVIYSSFVNKSKSYLELDAKASFLSGLGYGGSVHQDGITRQSTWWEKASIQMQIPEELPLGYGCNLTQTIFNGINVMAGVSLLSSPLTVMQAGWASLLVMLLFAVMCLYTADLMRHCFESREGIVSYPDIGEAAFGRYGRLIVSIILYIELFSYCVEFIIMEGDNLTGLFPGSSLDIGSLHLDSKHLFGILTALIILPTVWLKDLRIISYLSAGGVITTVVIIICVIVVGTTNVGFHHTGSFLHWSGIPFAFGIYGFGFAGHSVFPNIYQSMANKREFSKAILIVFILCVLLYGLVAIPGYLMFGDEVLSQITLNLPANAFASKIALWIIVLSPFTKYPFF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00487 414 MobiDBLite consensus disorder prediction 1 48 - -
Aip06g00487 414 Pfam Transmembrane amino acid transporter protein 139 413 IPR013057 -
Aip06g00487 414 Gene3D Amino acid/polyamine transporter I 137 409 - -
Aip06g00487 414 PANTHER OS05G0424000 PROTEIN-RELATED 27 413 - -
Aip06g00487 414 PANTHER AMINO ACID TRANSPORTER AVT1A 27 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00487 Aip-Chr6 5935652 5938371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00487 27 411 Amino Acid or Auxin Permease AAAP Family AT2G41190 59.453 1.60e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00487 K15015 - gmx:100790344 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00487 06 5935652 5938371 Aip06g00487 06 5935652 5938371 ECH