Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00452 ATGGCGCGAAAACAAAAACCTGGTGCTCGGGAACCAAAACCAAAACCAAAACCTTTGTCTCCAATTTCCATCGGTAACTGCGAGGTCACTGTTGAGGCCAAAAACTTCACATGCAAATCCGAATCAAACAGCACCGTAATCTCTCTCCCGAGAAACGGAAAGATAATAGTATCAGTGGCACAAGAAGAGTATGCGAACAATGGAAATGCTACTGGGGATTTAAATTCCGATGATAGAGAACATGAGTTCATGCTTGTTAGTCCTAAAGATGATGCTGGGATAAGCAAATCCTACCTTCAGGAAGTTCTAGAGATGTATAAGGCAGAGCTACCAGGAATGAATTATGCTGCTAATACTGGAAAGCAATCAAAATTTCTTGAAAGATGTGTGACCAATGGGAAATATCGAACACTACTTCTTAATTCCAGTTCTGTTGAAGATTCCGGAAAGGTTATAGCTGCAATTACATATCAAATCATCCCTGCAGATACAGAATATGCAGAGATCCCACTTACAGCTGTGAGGGAAATCTACCAACGGAAGGGTTTTGGCCGTCTGTTGTTTCTGGAGCTACAGAAGAGACTTCAAAATATTGGTGTTCGTTCCATTTTCTGTTGGGGAGACAAAGAATCAGAAGGATTTTGGCTTAAACAGGGTTTTATATCAATAGCACAGGTTGATGCCAAAGGTAAAGCCCGCAGGTTTCCTGTAAAAGCTAGTATTCGCAAAGCATTATGCTTTCCTGGTGGTTCAACTCTCATGGCATGCCATCTAAGGACAGAATTCTCAGCCGATGCAGCTGACTCTATGCACTGTCTTCCTTCACCTCTCTGTCATCATTCCTTGACACCTGCCATTGCTGAAAATGAGCAGCTGAAATGTTCAGGATTGCTGCACATTGATTTGAACCTGTCTAATCATTCAACCCATATTATAGAAAGTAAAGATAAAATTCAAGCTGAAGGTTTGATGAAAGCTGGATCGTCAAGAGAATATGGCAAACTGTGTGGGTTTGACAGTCACAATCTCCAACATGGCTGCAGTGACATTTTTCCTTTTGTCAGAGCATATGAGGACAGAAATGCTACTGCTGCAGAAAATTCACAGGATGAAATTGATGATAACATGAAGCTTTGTCATCTTTTTCCAAAAGCTGCAAAAAGGGGCTGGGAATCCTCTATATCCTCATTGAAATCTAAAAGGGTGAAGGGAAGCCAGTTGGCTGACTGTCGATCAGATTCTAGCAACGGTTTTACATCAGAGGCTAATAGGCCCAATCCTTGTTTTCAAGAAGTCCCTCGCGTTGATCCTCTGAGTGCAGAAGTTTCTGAGAAATATATGGAGGATCATGTACAATTAGAAGCACCCAACGACAAGGAACTGCCGTTGGCTAAACAATCCTTTAGAATTATGTTAATGAATATTGCAGATGATACTAAGAGAACACAGCTTTCAAAGGTTATTGAAGACCTTGGTGGAACTGTTGCGTATGATGGAAGCATAATAACACATGTTGTCACAGGAAAAGTGAGGAAAACTATGAATTTCTGCACTGCTCTCTGTTCTGGGGCTTGGGTGCTCTCATCTAGTTGGTTAAAGCAAAGCTTTCGTGAAGGCAGATTCGTCGATGAGTTGCCTCACATACTGAATGATGAGGAGTACATGCTGAAGCACAAATCTGATTTAAAAAGTGCAATCTTCCGAGCAAAAGCTAGCCCCCATTCTTTGTTTAAGGGCTATAATGTATGCATTGCAGCTCATGTTCGAACTCCTGCCGACACTCTATCTGCTATTGTCAGGTCTGCTGGTGGTAATGTTATCAATGGGCTGGAAAAAGTAAACGAGACATCAACAACAATCTTTGTGACATGCGAAGAAGATACAGAAGAAGCAATGATGGCTGCAAAGAAAGGAATCCGGACTTTCAGCAGTGAGTGGTTTATGAACTGTGTTATGAGACAGGAGCTTGACTTGCAGGCCTCCCAATTCGCGCAGTCCTTATGA 2004 0.4197 MARKQKPGAREPKPKPKPLSPISIGNCEVTVEAKNFTCKSESNSTVISLPRNGKIIVSVAQEEYANNGNATGDLNSDDREHEFMLVSPKDDAGISKSYLQEVLEMYKAELPGMNYAANTGKQSKFLERCVTNGKYRTLLLNSSSVEDSGKVIAAITYQIIPADTEYAEIPLTAVREIYQRKGFGRLLFLELQKRLQNIGVRSIFCWGDKESEGFWLKQGFISIAQVDAKGKARRFPVKASIRKALCFPGGSTLMACHLRTEFSADAADSMHCLPSPLCHHSLTPAIAENEQLKCSGLLHIDLNLSNHSTHIIESKDKIQAEGLMKAGSSREYGKLCGFDSHNLQHGCSDIFPFVRAYEDRNATAAENSQDEIDDNMKLCHLFPKAAKRGWESSISSLKSKRVKGSQLADCRSDSSNGFTSEANRPNPCFQEVPRVDPLSAEVSEKYMEDHVQLEAPNDKELPLAKQSFRIMLMNIADDTKRTQLSKVIEDLGGTVAYDGSIITHVVTGKVRKTMNFCTALCSGAWVLSSSWLKQSFREGRFVDELPHILNDEEYMLKHKSDLKSAIFRAKASPHSLFKGYNVCIAAHVRTPADTLSAIVRSAGGNVINGLEKVNETSTTIFVTCEEDTEEAMMAAKKGIRTFSSEWFMNCVMRQELDLQASQFAQSL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00452 667 Pfam Acetyltransferase (GNAT) family 145 220 IPR000182 GO:0016407
Aip06g00452 667 Pfam BRCA1 C Terminus (BRCT) domain 573 651 IPR001357 -
Aip06g00452 667 Pfam BRCA1 C Terminus (BRCT) domain 460 536 IPR001357 -
Aip06g00452 667 Gene3D BRCT domain 457 573 IPR036420 -
Aip06g00452 667 Gene3D BRCT domain 574 666 IPR036420 -
Aip06g00452 667 SUPERFAMILY BRCT domain 468 553 IPR036420 -
Aip06g00452 667 Gene3D - 80 261 - -
Aip06g00452 667 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 14 667 - -
Aip06g00452 667 SUPERFAMILY BRCT domain 570 656 IPR036420 -
Aip06g00452 667 ProSiteProfiles BRCT domain profile. 572 656 IPR001357 -
Aip06g00452 667 MobiDBLite consensus disorder prediction 1 23 - -
Aip06g00452 667 ProSiteProfiles BRCT domain profile. 466 549 IPR001357 -
Aip06g00452 667 CDD BRCT_PAXIP1_rpt6_like 576 657 - -
Aip06g00452 667 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 145 225 IPR016181 -
Aip06g00452 667 CDD NAT_SF 145 206 - -
Aip06g00452 667 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 84 242 IPR000182 GO:0016407
Aip06g00452 667 PANTHER N-ACETYLTRANSFERASE 14 667 - -
Aip06g00452 667 SMART BRCT_7 574 654 IPR001357 -
Aip06g00452 667 SMART BRCT_7 460 539 IPR001357 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip06g00452 BRCT 7.4e-05 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00452 - - aip:107645523 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00452 06 5394938 5401292 Aip06g00452 06 5394938 5401292 ECH