Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00428 ATGTTTTTCCGTTCTGGTTTCGAGGAAGGAAAAGAAGAACGAAAGGAAGAGAAAGCAAAGAGGAGATTGTTTTGCAACAATAGAAGTAAAGGGGGGCGCGTTTGGTCTTACCTGGGGACAAAGTTATTTGGAGTGGAGGTCGTTCGTCACCGGTGGTGGGTGCAGCTCGTCGTGGTAGGGCGTGAGGCTCTGAAGGTCAGTCGCTGCCTTCCTGCTATTGCTTTCCCGGAAGCTCCAGCAGACAAAACCAGCAACCGGTCCGTGGGGTGGTGGTCATTGTTGTCACTTTGCTTATCCCATCAGTTTAGTTTCTCATCTACCATCGCCGTCGGTAGTCATCCGGGCAATTGGCAAGTGGAGGCTGTGAGGATGTTGGAATCATGTTGGATAGTAGATGAGGTGGTAATAATGGCATCAAGTAGCAAGTTTTGGAAGGATGCGTATATGTGGAATGAGCCTCTTGCGGATTACTGGATGGAGGGCAATGCTGGTATGTCGAATCCACAGGACACAATGTTTGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAAGGAAGGGGGGCTTCAATGTTGCCCGGCTTCTTGGGTTTGGATGGGTTGCGAGCAGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCAGGCGGCTTCTATAACAATTACAGCCGACTGAAGGGCTTTGCATCACGGCGAGGCAAGACTGTTAGAAACACTGCCGGAGAGATCGTGCGGTACACTTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTAGTTACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGACGGTAGTGGGAGGTGGTATGTCTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTATTGATTATCTGCTGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCTTTCGCAGCACAACTAGGGGGTTTTAATCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAAAGAGGTCTGCAAGGCGGAGATGTAAGTGCGGCTATTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGTTACAAGTTGGGGACAGGGCAACACCTATGCAACTTGTTTTGGAGCGACGGTCGTTGCCAGGAAGATTATGGGATTTTCGGCGATGTGCTAGCATTCGACGCTACGTATGGCCGCAACAAGTACAACCTACCCGTTGTAGTCTTTTCTGGAGTAAACCACCACAACCAGACATGCGTATTTGGAACAGCAATGGTCTCCTGCGAATCACAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCACAATCGGTCATCACGGATGGCGACCCAGCCATGCGGATAGCAATCCAGTCTGTATTTCCTGATGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACGCGACTGCTAACATAAGCGACTCGAGATTCACACAAATGTTTAGACACTGCATGTTGGCAGATATGGAAATCGATGAGTTCGAAGCGCATTGGGAGGCAATGCTCAACGAGTGCGGTGTTAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCCACCGCATACATCCGCGGTAGATTTTTTGCTGGAGTACGGACTACCTCTAGGTGCGAGTCACTACATGCCAAACTAGGGAGGTTTGTCGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGACGAGCTAGACTTTCATGGAACACCTGGAACACCTGTGCTATAA 1950 0.4856 MFFRSGFEEGKEERKEEKAKRRLFCNNRSKGGRVWSYLGTKLFGVEVVRHRWWVQLVVVGREALKVSRCLPAIAFPEAPADKTSNRSVGWWSLLSLCLSHQFSFSSTIAVGSHPGNWQVEAVRMLESCWIVDEVVIMASSSKFWKDAYMWNEPLADYWMEGNAGMSNPQDTMFDTRVEEDAELSDWEGRGASMLPGFLGLDGLRAEDVLEMEFSSPQEAGGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKDGSGRWYVSRFVEEHNHELAYGKLIDYLLSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAIRYLEGLARMDGKMFWRYKLGTGQHLCNLFWSDGRCQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIQSVFPDAHHRLCAWHLLRNATANISDSRFTQMFRHCMLADMEIDEFEAHWEAMLNECGVREVEWVKDLYTKKHAWATAYIRGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFHGTPGTPVL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00428 649 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 207 641 IPR031052 GO:0006355
Aip06g00428 649 Pfam FAR1 DNA-binding domain 222 311 IPR004330 -
Aip06g00428 649 Pfam MULE transposase domain 431 525 IPR018289 -
Aip06g00428 649 PANTHER OS02G0262500 PROTEIN 207 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00428 Aip-Chr6 5030236 5037675 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g00428 MULE 3.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00428 - - aip:107620408 1069.3