Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00420 ATGGAGTTGCATGCAGAAGTGATGGAGAATGAAAATAATAATGTTGTTATTAGGAGGGAAGTGTGCTTGGTTTGGGAAGAATTGACAGTGGTTATTAACAGCGGCAAGAGCAGTAATAATAGTGAAAGAAGGAAGAAAGTGTTGAATGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACCTTCCTTGATGCTCTTGCTGGAAGACTTGCAAGCAATGTCAGCATTACTGGAAATGTGCTACTGAATGGCACTAAGAGAACCACATCCTCTAGAGATCTTTCTTATGTAACACAAGAAGACCATTTCTTAGGAACACTAACTGTGAGGGAAACACTCACATATGCTGCTTATCTGAGACTTGCTGCAAACATGGCCAGTGATGAGATTGACAAGGTTGTAGCTAAGACGCTCGACGAAATGGGTCTTCAAGATTGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAAATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACCAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCAGAAGCATTGCACATGATGGCAGAATTGTTATTTGCTCCATTCACCAACTTAGCAGTGAAGTTTTCAACCTCTTTGATGACATGGTGATCCTCGCAGGAGGCGAAACTGTGTATTTTGGAGAAAGGACTAAAGCTGTTAAGTTCTTTGAAGATGCAGGGTTTCCTTGTCCAACAAGAAAGAACCCTCCTGAGCACTTCCTTCGTTGCATCAGCCCCGAATTCGATAGTGTTCTAACTTTGATACAGTCCAAGAATGCCAATAATGTTACACCATCATCATGGAATTCTCTAATGAATATGACAACAGAGGAGATTAAATGGAAACTTATAAACTGTTTCAAGAATTCTAGGCAGTTAGCAAATGCAAGGGAAAAGATCAGAGAAATCAAACTAAGAAAAGAACCTCCAATAGAGAGGGCATATGATACTAGAACACTGAAGCAGCTATGCACATTGACTCATAGATCATTCCTTAACATGACCAGAGACATTGGTTACTATTGGTTAAGGATTCTGTTCTACATGTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACTAGTAATAGTGCAATCTTATCAAGAAGCAAGATTGATGGATTCATCTATGGCTTCATGATCTTTCTGTGCATTGGTGGCTTACCCTTCTTCCTTGAGGACTTAAAGGTCTTCGAGCGCGAAAGATTCGGAAGGCATTATGGAGAGGCAGTTTATGTTCTTTCGAGTTTCATCTCGTCACTTCCTTTTGTTGTTTTCATTTCCCTTACTTCAGGAACAACACTTTACCACATGGTGAATTTTCACCCTGGATTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGGTGCATGCTTTTAGTTGCTGCTCTTGTTTCCAACCAGCTCCTTGCTATTGGAACATCAGCTGCTATAACTATACTGATGATGATGCCATCAAATGCATTTCGAAGAATGATTGACATTCCGAAATTCTTCTGGCGCTATCCCATGTCCTACATCAGTTATATCGCTTGGTCAATACAGCAGGGGCAATACAAGAATGACCTGATTGGACTTGAATTTGAAGGAATGATGCCAGGAGACAGAAAGATAAAGGGTGAAGTGATACTTGAAGAAATGTTTGGAATAAGAACAGATTATTCAAAATGGTGGGACATAGGAGCCTTAGTTTGCTTGTTAATATCATACAGATTGATGTTTTTCTTGGTTCTTAAGCATAGGGAGAGAGCTTCATCACTATTTCACACCATTTTACTCACAAGATCCTCCCTCAAACTCAAACTCAATCTCAATCTCAATTTCAATCACAAATATATTGCTACCAAGAGACACCATTCCCTATATCCTTTCTCATCTCAACATGGATTTACCTCTCCAATAATATCCTA 2060 0.399 MELHAEVMENENNNVVIRREVCLVWEELTVVINSGKSSNNSERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLASNVSITGNVLLNGTKRTTSSRDLSYVTQEDHFLGTLTVRETLTYAAYLRLAANMASDEIDKVVAKTLDEMGLQDCAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLRSIAHDGRIVICSIHQLSSEVFNLFDDMVILAGGETVYFGERTKAVKFFEDAGFPCPTRKNPPEHFLRCISPEFDSVLTLIQSKNANNVTPSSWNSLMNMTTEEIKWKLINCFKNSRQLANAREKIREIKLRKEPPIERAYDTRTLKQLCTLTHRSFLNMTRDIGYYWLRILFYMLVSVCAGFLYLNVGTSNSAILSRSKIDGFIYGFMIFLCIGGLPFFLEDLKVFERERFGRHYGEAVYVLSSFISSLPFVVFISLTSGTTLYHMVNFHPGFSHYCYFCINLFCSISVTEGCMLLVAALVSNQLLAIGTSAAITILMMMPSNAFRRMIDIPKFFWRYPMSYISYIAWSIQQGQYKNDLIGLEFEGMMPGDRKIKGEVILEEMFGIRTDYSKWWDIGALVCLLISYRLMFFLVLKHRERASSLFHTILLTRSSLKLKLNLNLNFNHKYIATKRHHSLYPFSSQHGFTSPIIS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00420 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 265 IPR027417 -
Aip06g00420 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 22 645 - -
Aip06g00420 686 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 22 645 - -
Aip06g00420 686 ProSitePatterns ABC transporters family signature. 171 185 IPR017871 GO:0005524
Aip06g00420 686 Pfam ABC-2 type transporter 228 284 IPR043926 GO:0140359
Aip06g00420 686 Gene3D - 29 265 IPR027417 -
Aip06g00420 686 Pfam ABC-2 type transporter 361 565 IPR013525 GO:0016020|GO:0140359
Aip06g00420 686 Pfam ABC transporter 48 199 IPR003439 GO:0005524
Aip06g00420 686 SMART AAA_5 57 248 IPR003593 -
Aip06g00420 686 CDD ABCG_EPDR 23 253 - -
Aip06g00420 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 271 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00420 Aip-Chr6 4960214 4964691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00420 46 247 Calmodulin-binding Proteins AT2G36910 27.523 2.69e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00420 - K05681 aip:107646291 1319.29