Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00419 ATGTGTACATGCATGTTGCCTGTTATTATGGCTCCAACAACAATGGAGTTGCATGATGGTGGTGCAATCATGGAGAGTGATAATAATATTAGAGAAGTGTGCTTGGTTTGGGAGAATTTGGAAGTGGAAGTAGTAAGCAGTTATAGTAATGAAAGAAGGAAGAAAGTGTTGAATGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACTTTCCTTGATGCTCTTGCTGGAAGGCTTGGCGGCAATGTTAGAATCACTGGAAATGTAACACTCAATGGGACTAAGACAACTACAAGCTGCAGAAACATTAATTATGTAACTCAAGAAGACTATTTCCTGGGAACTCTAACAGTGAGGGAAACACTAACATATGCTGCTCATCTGAGACTTGCTGCAAACAAGAGCAAAGATGAGATTGACAAGGTTGTAGCCAAGACGCTCGATGAAATGGGTCTTGAAGAATGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAAATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACCAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCACAAGCATAGCACATAATGGAAGAATAGTATTATGCTCCATTCACCAACTTAGCAGTGAAGTTTTCAATCTCTTTGATGATTTGGTGCTCCTTGCAGCAGGTGAAACTGTCTATTTTGGAGAAAGAACTAATGCTATTAAGTTCTTTGCTGATGCAGGGTTTCCTTGTCCAACAAGAAAGAATCCTCCGGAGCACTTCCTTCGATGCGTTAGTCCAGAGTTTGATAATGTTCTAAGTCTAATGCGGTCCAAAAATGTCAATGATACCCCATCATCATGGAATTCTTTAGTGAATATGACTACAGAGGAGACCAAATGGAATCTGATAAACAGTTTCAAGAATTCCATGCATTCAGCAAATGTGAGAGAAAAAATCAGAGAAATCAAACTAAGAAAAGAAGCTGTTATTGAGAGAGCATATGATACTAGCACACTGAAGCAGCTATGCACTTTGACTCACAGATCATTCCTTAACATGACTAGAGACATTGGTTACTACTGGTTAAGGATCTTGTTCTACATCTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACAAGTAATAATGCAATCTTGCCAAGAAGCAAGTGTGATGGATTCATCTATGGCTTTATGACCTTCCTTTGTATTGGTGGCATGCCCTTCTTCCTTGAGGAGTTAAAGGTGTTCGAAGGCGAAAGGTTTGGGAGGCGTTATGGCGAGGCCATTTACGTGCTGTCGAGTTTCATATCATCACTCCCTTTTGTTGTTGCCATTTCCCTGACTTCAGGAACAATACTTTACCACATGGTGAATTTTCACCCTGGATTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGCTCCATGCTTGTGGTTGCAGCACTAGTCTCCAACCAATTGCTAGCTATTGTAACTGCAGCTGGTGTATCTGTACTCATGTTGATGCCATCAAATGTAGCCAGAAGGATAACAGACATTCCTAAATTCTTCTGGCGCTATCCAATGTCCTACATCAGTTATATTGCATGGTCCATAGAGGGTCAATACAAGAATGACTTCGTTGGACTTGAATTTGAACCACTAATACCTGGGGATAGGAAGATAAAAGGTGAGGTGATACTTAAGGAAATACTTGGAATCCAAACAGATTATTCAAAATGGTGGGATGTTGGAGTCTTGGTTTTGTTGTTAATATCTTATAGAGTGCTTTTTTACTTGGCTCTTAAGCATAGGGACAGAGCTTCATCAATATTACGCACCACAATGAGTGAATGA 1956 0.4029 MCTCMLPVIMAPTTMELHDGGAIMESDNNIREVCLVWENLEVEVVSSYSNERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLGGNVRITGNVTLNGTKTTTSCRNINYVTQEDYFLGTLTVRETLTYAAHLRLAANKSKDEIDKVVAKTLDEMGLEECAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLTSIAHNGRIVLCSIHQLSSEVFNLFDDLVLLAAGETVYFGERTNAIKFFADAGFPCPTRKNPPEHFLRCVSPEFDNVLSLMRSKNVNDTPSSWNSLVNMTTEETKWNLINSFKNSMHSANVREKIREIKLRKEAVIERAYDTSTLKQLCTLTHRSFLNMTRDIGYYWLRILFYILVSVCAGFLYLNVGTSNNAILPRSKCDGFIYGFMTFLCIGGMPFFLEELKVFEGERFGRRYGEAIYVLSSFISSLPFVVAISLTSGTILYHMVNFHPGFSHYCYFCINLFCSISVTEGSMLVVAALVSNQLLAIVTAAGVSVLMLMPSNVARRITDIPKFFWRYPMSYISYIAWSIEGQYKNDFVGLEFEPLIPGDRKIKGEVILKEILGIQTDYSKWWDVGVLVLLLISYRVLFYLALKHRDRASSILRTTMSE 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00419 651 Pfam ABC-2 type transporter 237 357 IPR043926 GO:0140359
Aip06g00419 651 Gene3D - 30 274 IPR027417 -
Aip06g00419 651 SMART AAA_5 66 257 IPR003593 -
Aip06g00419 651 Pfam ABC transporter 57 208 IPR003439 GO:0005524
Aip06g00419 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 271 IPR027417 -
Aip06g00419 651 CDD ABCG_EPDR 35 262 - -
Aip06g00419 651 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 40 280 IPR003439 GO:0005524
Aip06g00419 651 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 34 645 - -
Aip06g00419 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 34 645 - -
Aip06g00419 651 Pfam ABC-2 type transporter 369 577 IPR013525 GO:0016020|GO:0140359
Aip06g00419 651 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00419 Aip-Chr6 4943933 4948890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00419 47 249 Calmodulin-binding Proteins AT2G36910 28.440 3.55e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00419 - K05681 aip:107646291 1061.98