Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00413 ATGGGAACTGCCTCCAGGCAGTTGAAGGTTATGCTCCGCAAGAACTGGCTCCTCAAAATTCGTCACCCTTTCGTTACTGCAGCTGAGATATTGCTCCCTACGGTTGTGTTGTTGCTGTTAGTGGCTGTGAGGACTCAAGTTGACACACAAATTCATCCAGCTGAACCGCACATTCAGAAAGAGATGTTTGTGGAGGTGGGTAAAGGTATATCCCCTAACTTCCAACAAGTTTTGGCATCCTTGTTGGAGGAAGGGGAGTATTTAGCTTTTGCACCAGATACCGATGAGACGAAGCTGATGATAGATGTAGTGTCCATAAAATTCCCACTCCTGAAGCTTGTTAGTCGAGTGTACAAAGATGAGGTAGAGTTGGAAAGCTACATTCGCTCAGATGCTTATGGTACCTGCAGTCAAGCAAGGAATTGTTCAAATCCGAAAATTAAAGGAGCTGTTGTATTTTATGAACAAGGTCCTCAGTCGTTTGATTATAGCATACGCCTCAATCATACATGGGCATTCTCCGGTTTCCCAGATGTAAAAACAATAATGGACACAAATGGCCCATTTCTTAACGACTTGGAATTGGGTGTTAGTGCTGTACCAACAATGCAGTACAGCTTCAGTGGGTTTTTTACTCTCCAGCAAATGGTCGATTCATTTATAATATTCATTGCTCAACAGTCTGGCATAAATTCCAGCACTGAACGCATAACCCTTCCTCTATCAGGCTTCTATTACACTGATTTCTCTCTGAATGCTACATGGAATCAGTTTAATCCCACTCATATACGAGTATCTCCATTTCCCACTCGAGAGTACACTGATGATCAGTTCCAGTCAATCATAAAGAAAGTCATGGGAATATTATACCTATTGGGTTTTCTCTATCCAGTTTCGCGCCTCATCAGTTATTCTGTTTTTGAGAAGGAACAGAAGATTAAAGAAGGACTCTATATGATGGGCCTGAAAGATGGGATATTTCATCTCTCTTGGTTGATCACATATGCTTTGCAGTTTGCAGTGTCTTCCGGGATCATTACTGCTTGCACCATGGATAATTTATTCAAGTATAGTGATAAGACATTGGTGTTTGCCTACTTTTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTTATATCAACATTTTTCAAACGGGCCAAAACAGCTGTTGCAGTTGGAACGCTGTCTTTTCTTGGTGCTTTTTTCCCTTATTACACTGTCAATGATGAGGGTGTTTCAATGGTATTGAAGGTTCTTGCTTCTATACTTTCACCTACAGCCTTTGCTCTCGGGTCAGTTAACTTTGCTGATTATGAGCGTGCTCATGTGGGACTGCGTTGGACCAACATATGGCGGGAATCATCTGGAGTGAATTTTTCCCTATGTCTTTTGATGATGATACTTGATACACTGCTATATTGTGCAATGGGTCTATATTTTGACAAGGTTCTTCCACGGGAGTATGGACGGCGATATCCGTGGTCTTTTGTTTTCCGAAGAGACTTCTGGAGAAAGAATAAAACTGGAAAACACTGCCCCTCCAATTTTGAAGTTAAAGTTGATGGTAGGAATTCCGAGTCAAGACCTTCTATAGAAGCAATAAGCCTAGATATGAAACAACAGGAGCTTGATGGCAGATGCATTCAGATAAGGAATTTGCATAAAGTGTATGCTACTAGAAAAGGAGATTGCTGTGCTGTTAACTCCTTACAACTTACATTGTATGAACATCAGATTCTTGCTCTTCTAGGACATAATGGAGCTGGTAAAAGTACAACAATCTCGATGCTTGTTGGTCTTCTTCCTCCTACATCAGGGGATGCTTTGGTGTTTGGAAAGAACATTGTATCAGATATTGTAAGGGAGCATTTAGAAATATTCGCCATATTAAAGGGTGTTGATGAAGACTCACTGGAGGCTGCTGTTACCAATATGGCTGACGAGGTGGGCCTGGCTGATAAAATTAACAGTGTTGTGAGAGCTCTTTCTGGTGGCATGAAGAGAAAATTGTCTCTTGGAATTGCATTGATAGGGAACAGTAAGGTAGTTATAATTCTTGATGAACCTACCAGCGGAATGGATCCATACTCAATGCGTTTGACTTGGCAGTTAATAAAAAAATTTAAGAAGGGCAGGATAATCTTACTAACAACTCATTCAATGGATGAAGCAGATGAACTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCACTTTTCTTGAAGCATCATTATGGAGTTGGTTATACTCTAACTCTTGTAAAGTCAGCTCCTACTGCTTCTATAGCTAGTGATATAGTATATCGTCATGTTCCCTCAGCAACCTGTGTAAGCGAGGTGGGAACTGAGATTTCCTTTAGGCTTCCGCTGGCATCTTCATCAGCTTTTGAGGGGATGTTTAGGGAAATTGAAGGTTGCATGAAAAAACCACTTTTGAACATGGAAATAAGTGGTAGTGGTAACGAAGACAGTCTTGGTATTGAAAGCTATGGTATATCAGTCACAACCCTAGAGGAGGTATTTTTGAGAGTTGCAGGATGTGACTATGATGGAGTCGAATGCTTCGAGGGAAATGATCATTCCCTTGTGTCTGACTCTGTGGCTTTGCTTGGATCTTATGACCATCCCTCCACCAAAAAATGTTTTTTAGGAAATTATAAGAAGTTCCTTGGTTTGATATCTAGCATAGTGGCAGGAGCTTGTGGTTTGATTTTTGCTATGGTTATAAGTTTCATAAACTTCGTGGGTATGCTGTGTTGTAGCTGTTGTCTCATTTCTAGGCTCGAGCCACATCCTGATCAGCAGGGCCTGATCCTTTCAACTTCTTATTTTAATCCTCTGTTGACTGGTGGGGGTGGGGGAGGTCCAATTCCTTTTAATCTATCTTTGCCTATTGCTGAAAAGGTAGCACAAAATGTCAAAGGAGGGTGGATTCAAAGATACAAGCCAAGCTCATACAAGTTTCCTAATTCAGGGAAGGCATTAGCTGATGCAGTGGAAGCAGCAGGGCCAACTCTAGGACCTGCTCTACTTTCAATGAGTGAATATTTGATGTCTAGCTTCAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGAACAAAATAGTGATGGGAGCTTAGGCTACACTGTATTGCACAACTGTTCTTGCCAGCACGCTGCTCCCACCTTTATCAATGTTATGAACAGTGCCATTCTTAGACTTGCTACTGGTGACACAAATATGACAATTCAGACACGCAACCACCCACTACCAATGACACAAAGCCAGCTCGTACAACGTCATGACCTGGATGCCTTCTCTGCTGCAATTATTGTCAATATTGCGTTCTCTTTCATACCTGCCTCATTTGCTGTTCCCATTGTTAAGGAACGTGAAGTGAAAGCTAAGCACCAGCAGCTAATTAGTGGGGTTTCTGTCCTTTCATATTGGGCTTCTACATATATTTGGGACTTCGTGAGCTTCTTGTTTCCGGCCTCATTTGCCATAATTCTCTTTTACATTTTTGGTTTGGATCAATTTGTTGGAGGGGTATCTTTGTTACCGACTACACTGATGCTTTTGGAATATGGACTTGCAGTTGCATCATCAACTTACTGCCTTACATTTTTCTTTTTTGACCATACCATGGCTCAGAATGTGGTTCTTTTAATTCACTTTTTCACTGGATTGATTCTAATGGTTATCTCATTCATTATGGGACTTATACCAAACACAACAACTGCCAATACTTTTCTTAAGAATTTTTTCAGAATTTCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCATTGGCACTTCTACGGCAAGGAATGAAAGATAAAACAAGTGATGGGATATTTGACTGGAATGTTTCAGGTGCCTCTATTTGTTATCTTGCTATTGAGAGCATTGGTTACTTTTGTTTGACACTTGCACTTGAAGTTTGTCCCTCCCTCAAATTAACTCCGTTTATGATCAAGAAGTGGTGGCAGAGTTTAAACATCTTCCAGCGTAATACCACTTATCTGGAACCTCTCTTAGAACCTCCTTTGGAAACTGTTTCAATGGACTTTGATGAAGATGTGGATGTGAAAACCGAAAGAAATAGAGTACTTTCTGGTTCCCTCGATAATTCTATTATCTACCTGCGTAATCTTCGAAAGGTGTATTCTGAAGGGAAGTATCTAGGGGAAAAGGTTGCAGTAGATTCGTTAACCTTTTCGGTTCAGGAAGGAGAATGTTTCGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGTTATGCGGGGAAGAATCTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGCTCCCATCCCAAGGCTGCTCGCCAATATATTGGATATTGTCCGCAATTTGATGCTTTATTGGAGTTTTTGACCGTTCAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGAATACACTATAGATAATGTTGTTAAGGAAAAGATGGTGGAATTTGGCTTATTGAAGCATGCTAATAAACCGTCATTTACTCTTAGTGGGGGGAATAAAAGGAAACTATCTGTTGCAATCGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAACCATCTACAGGTATGGATCCCATCGCCAAAAGATTTATGTGGGATGTAATATCTAGGATCTCAACAAGAAGGGGGAAAACTGCAGTAATTCTAACTACCCACAGCATGAATGAAGCTCAAGCCTTATGTACCAGGATGGGAATAATGGTTGGTGGACGATTAAGATGCATCGGAAGTCCTCAGCATTTAAAAACAAGATTTGGGAATCATCTGGAACTAGAGGTAAAACCTACTGAAGTGAGTTCTGCAGACTTGCAAACGCTATGCCAAGCTATTCAGGAAAGAGTTCTCGATGTCCCTTCTCATCCTAGAAGCTTGCTTGGCGACCTTGAAGTTTGCATTGGTGCCACTGACTCCATTACTGCAGAAAATAGTTCCATTGCAGAGATTAGCTTGACACGAGAAATGATAAGCTTAATTGGGCGCTGGCTTGGCAATGAAGAAAGAGTCAAGACACTAATCTCCTGTACACCTGTCTCTGATGGAGCTTCTAGGGAACAATTATCTGAACAATTGTTTCGAGATGGTGGTATTCCATTACCCGTATTTTCCGAGTGGTGGTTGTCGAAACAAAAATTCTCAGAAATTGATTCATTTATACTTTCATCATTTCGGGGAGCAAGATGGCAAGGGTGCAATGGTTTGAACATCAGATACCAGATACCCTATGAAGAAGGTTTGTCTCTGGCTGATGTCTTTGGTCACCTTGAAGGAAACAGAGATAGATTAGGGATTGCTGAGTACAGCATCAGCCAGTCAACTCTGGAGACAATATTTAATCATTTTGCAGCTACTTCATGA 5448 0.4097 MGTASRQLKVMLRKNWLLKIRHPFVTAAEILLPTVVLLLLVAVRTQVDTQIHPAEPHIQKEMFVEVGKGISPNFQQVLASLLEEGEYLAFAPDTDETKLMIDVVSIKFPLLKLVSRVYKDEVELESYIRSDAYGTCSQARNCSNPKIKGAVVFYEQGPQSFDYSIRLNHTWAFSGFPDVKTIMDTNGPFLNDLELGVSAVPTMQYSFSGFFTLQQMVDSFIIFIAQQSGINSSTERITLPLSGFYYTDFSLNATWNQFNPTHIRVSPFPTREYTDDQFQSIIKKVMGILYLLGFLYPVSRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWLITYALQFAVSSGIITACTMDNLFKYSDKTLVFAYFFIFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMVLKVLASILSPTAFALGSVNFADYERAHVGLRWTNIWRESSGVNFSLCLLMMILDTLLYCAMGLYFDKVLPREYGRRYPWSFVFRRDFWRKNKTGKHCPSNFEVKVDGRNSESRPSIEAISLDMKQQELDGRCIQIRNLHKVYATRKGDCCAVNSLQLTLYEHQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIVREHLEIFAILKGVDEDSLEAAVTNMADEVGLADKINSVVRALSGGMKRKLSLGIALIGNSKVVIILDEPTSGMDPYSMRLTWQLIKKFKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIASDIVYRHVPSATCVSEVGTEISFRLPLASSSAFEGMFREIEGCMKKPLLNMEISGSGNEDSLGIESYGISVTTLEEVFLRVAGCDYDGVECFEGNDHSLVSDSVALLGSYDHPSTKKCFLGNYKKFLGLISSIVAGACGLIFAMVISFINFVGMLCCSCCLISRLEPHPDQQGLILSTSYFNPLLTGGGGGGPIPFNLSLPIAEKVAQNVKGGWIQRYKPSSYKFPNSGKALADAVEAAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDEQNSDGSLGYTVLHNCSCQHAAPTFINVMNSAILRLATGDTNMTIQTRNHPLPMTQSQLVQRHDLDAFSAAIIVNIAFSFIPASFAVPIVKEREVKAKHQQLISGVSVLSYWASTYIWDFVSFLFPASFAIILFYIFGLDQFVGGVSLLPTTLMLLEYGLAVASSTYCLTFFFFDHTMAQNVVLLIHFFTGLILMVISFIMGLIPNTTTANTFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGIFDWNVSGASICYLAIESIGYFCLTLALEVCPSLKLTPFMIKKWWQSLNIFQRNTTYLEPLLEPPLETVSMDFDEDVDVKTERNRVLSGSLDNSIIYLRNLRKVYSEGKYLGEKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARQYIGYCPQFDALLEFLTVQEHLELYARIKGVPEYTIDNVVKEKMVEFGLLKHANKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRMGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSADLQTLCQAIQERVLDVPSHPRSLLGDLEVCIGATDSITAENSSIAEISLTREMISLIGRWLGNEERVKTLISCTPVSDGASREQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARWQGCNGLNIRYQIPYEEGLSLADVFGHLEGNRDRLGIAEYSISQSTLETIFNHFAATS 1815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00413 1815 CDD ABC_subfamily_A 1387 1613 - -
Aip06g00413 1815 Pfam ABC transporter 570 693 IPR003439 GO:0005524
Aip06g00413 1815 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1579 1812 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aip06g00413 1815 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1031 1642 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aip06g00413 1815 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 1241 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aip06g00413 1815 ProSitePatterns ABC transporters family signature. 664 678 IPR017871 GO:0005524
Aip06g00413 1815 Gene3D - 537 772 IPR027417 -
Aip06g00413 1815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1382 1619 IPR027417 -
Aip06g00413 1815 Pfam ABC-2 family transporter protein 1038 1317 - -
Aip06g00413 1815 Pfam ABC-2 family transporter protein 230 480 - -
Aip06g00413 1815 SMART AAA_5 578 740 IPR003593 -
Aip06g00413 1815 SMART AAA_5 1417 1604 IPR003593 -
Aip06g00413 1815 ProSitePatterns ABC transporters family signature. 1524 1538 IPR017871 GO:0005524
Aip06g00413 1815 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 550 763 IPR003439 GO:0005524
Aip06g00413 1815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 768 IPR027417 -
Aip06g00413 1815 Pfam ABC transporter 1409 1551 IPR003439 GO:0005524
Aip06g00413 1815 Gene3D - 1379 1629 IPR027417 -
Aip06g00413 1815 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1387 1625 IPR003439 GO:0005524
Aip06g00413 1815 CDD ABC_subfamily_A 550 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00413 Aip-Chr6 4861086 4884220 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00413 525 774 Calmodulin-binding Proteins AT2G36910 24.820 8.45e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00413 K05643 - gmx:100803263 3127.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00413 06 4861086 4884220 Aip06g00413 06 4861086 4884220 ECH