Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00402 ATGCCGGAACCTGTCCCCTTCGGCATCATGGAGAGACTGATAGCAGATCTTGCTTCACCTGCACTTGATGAAATCCGTTTGAAGGGCGGTTTTTCTGACGAGATGAATCAGTTGAAAGACACTCTTTTATTGGTCAAATCTGTGCTGCTGGATGCGGAGAGAAAGCAAGAAAATAACCGACCTCTGACGGTGTGGCTAAGGGAGTTGAAAAATGTCCTCTGTGATGCTGACGACTTCCTTGATGATATTCAAACCCAAGTGTTACGGAATCATGTGGATAGAGCCTCCAAGGTACAGCAATTCTTCACAACTTCTAATTCTATTGTTTTTCGCGTTAAGATGGCTCGAAAAATGAAGTCACTGAAGAAGAGACTAGACATGGTTGCAGCTGATATGAGTAAGTTTGCTCTAGAAGCAATTGATGTTGATAACCACGTTTCACATAGGAGCAGGGAAACGACCTCTCTCGTTGCTGCAGATGTGAATGTGATAGGACGGGAGATCGATAAAGAATTTATCATAGACCTCCTAATGCAGCAGAATCCTGAAGAtgatgacgaacgtatcccagttattcccattgtggggacgggaggagtaggaaagaccacacttgctcagcttgtcttccgtgatgagaggGTTGTTGAAGACTCTGGCACTTTCTTTTATTTTCAAATTCATGATTTAGTTCATGATCTCGCATTACTTGTTGCAAGAAATGAATGCGTGCTAGTCAGTTCAGACATGCAAAATATATCAGGAAATATTCTGCATCAATCTTATATTGAAGATGATTTGCGTGGCATTTTATTCTCACGAGGAATATTTCGTGTGAGAACCATACTATCTCCAGTTCATGGAGTGGGAGCCAAGGATGAAGTTTTGTTGAATGCATGGATATCAAGATACAAATCCTTGCGATTTTTGGATTTGAGTGATTCTACTTATGAGACTTTGCCCCAGTCCATTGTGACGTTGAAACATTTAAGATTTCTCTCTCTCAGGAACAATACCAAAATTCAGAGGCTGCCTGCTTCAATTTGCAAACTACTAAATTTGCAATCTTTGCTTCTTGATGGGTGCACAAAGCTTGAAGTATTGCCACAAGAATTGAGAAATTTGATCAATCTCCGACAACTGGGGATAACCACAAAGCAATCTGTTTTGCCTGAGAGTGACATTGCAAAGCTGAGCTCTCTTGAATATTTATGTATTAAAAAATGTGACAAGCTGGAGTCCTTGTTTGTAGGGAGAAAGTTGCCTAATCTTCGAACTTTGGAGGTTGATAGTTGTGAGAGGTTGAAGTCTTTACCACTTAATGTTAACCATTTTCCTCAATTGGAGACTTTGGTAATCAACAAGTGTGGTGATTTGGACTTCTCTGAGGAAGTGCGGAACTCTACCCTGAGACTAAAAGTCCTTTATCTTCATTCTTTGCCACAGCTGGTGGAGACCTTGCCTAGTTGTTTTCAAGGATCGGCAAGCACATTAGAAGCTTTGGCTATTAAAGAGTGCAACAGGCTGGAGTCACTTCCTGAATGGCTGTCAACTCCAAGTTCATTGAAATCTCTTCAAATAACAAATTGTCCTAATTTGAAGTCTCTCCCCAGTGACCTTCATCGCCCAGCACTTAAATCATTCGAAATCAGTGATTGTCCTAGATTACAGACGACTCACCAGCTCAAGATGTAG 1695 0.387 MPEPVPFGIMERLIADLASPALDEIRLKGGFSDEMNQLKDTLLLVKSVLLDAERKQENNRPLTVWLRELKNVLCDADDFLDDIQTQVLRNHVDRASKVQQFFTTSNSIVFRVKMARKMKSLKKRLDMVAADMSKFALEAIDVDNHVSHRSRETTSLVAADVNVIGREIDKEFIIDLLMQQNPEDDDERIPVIPIVGTGGVGKTTLAQLVFRDERVVEDSGTFFYFQIHDLVHDLALLVARNECVLVSSDMQNISGNILHQSYIEDDLRGILFSRGIFRVRTILSPVHGVGAKDEVLLNAWISRYKSLRFLDLSDSTYETLPQSIVTLKHLRFLSLRNNTKIQRLPASICKLLNLQSLLLDGCTKLEVLPQELRNLINLRQLGITTKQSVLPESDIAKLSSLEYLCIKKCDKLESLFVGRKLPNLRTLEVDSCERLKSLPLNVNHFPQLETLVINKCGDLDFSEEVRNSTLRLKVLYLHSLPQLVETLPSCFQGSASTLEALAIKECNRLESLPEWLSTPSSLKSLQITNCPNLKSLPSDLHRPALKSFEISDCPRLQTTHQLKM 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00402 564 Gene3D Ribonuclease Inhibitor 461 563 IPR032675 -
Aip06g00402 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 257 IPR027417 -
Aip06g00402 564 Gene3D Ribonuclease Inhibitor 292 386 IPR032675 -
Aip06g00402 564 Gene3D Ribonuclease Inhibitor 387 460 IPR032675 -
Aip06g00402 564 Pfam Rx N-terminal domain 10 96 IPR041118 -
Aip06g00402 564 SUPERFAMILY L domain-like 227 558 - -
Aip06g00402 564 PANTHER OS08G0543100 PROTEIN 225 540 - -
Aip06g00402 564 PANTHER OS08G0543100 PROTEIN 29 217 - -
Aip06g00402 564 Gene3D - 144 266 IPR027417 -
Aip06g00402 564 Gene3D - 9 136 - -
Aip06g00402 564 PRINTS Disease resistance protein signature 419 435 - -
Aip06g00402 564 PRINTS Disease resistance protein signature 191 206 - -
Aip06g00402 564 PANTHER DISEASE RESISTANCE PROTEIN RP 225 540 IPR044974 GO:0006952
Aip06g00402 564 PANTHER DISEASE RESISTANCE PROTEIN RP 29 217 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00402 Aip-Chr6 4748843 4751320 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00402 363 558 WRKY Transcription Factor Family AT5G45050 23.980 1.23e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00402 - - aip:107646285 691.034