Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00393 ATGGCTGAATCATTCATCTTCAGCATTGCTGAATCACTCATAACTAAGCTTGCTTCTCTTGCATACCAAGAAGCGTCTCGGGTGGAGCAGAACCACCAACTGCGGGAGTGGCTGAAGCAGATCAAACTCATCTTCAATGATGCTGAGAATGTGCTTGATCAAGTTGACTGTGAAACACTGCGCAACCAAGTCATCAGAGACTATGGCACTCCCAAGGACAAGGTAGGCCGCTTCTTCTCGAGTTCTAATCCACTTGTGTTTCGTTATAAGCTTGCTCTTCAGATCAAAGATATTAGGAAGAGATTAGACAGAGTAGCAGCTGATAGGGATAAGTTTGGGCTTCAAGTAATTGATGTTGATAGGCGAGTTGTGCATAGGAGGGAAATGACTTACTCCCATGTTGTTGAGTCTGATGTCATAGGACGTGCTCATGATAAAGAAAAGATTGTAAAGCTCTTGATGGAACCGAGTCTTGACAACAATGGTGACTCCAAACATATCtctgtcattcccattgtgggaattggaggtttgggaaaaaccactcttgctaagcttgtcttcaacgacgaaaggataagagagtcttttccgatgaaaatgtgggtgtgtgtgtctgatgactttgatatcaagcaattgattattaaaatcatcaatgctgttactgttagtggtgctaattctgctgatgctctggtggcccaacaaaccttgagagacatggacattgaacaattgcaatatcttcttagaaataagctaactggtcaaaagttcttgcttgtcttggatgatgtatggagtgaagatcgtgccaaatgggttgaacttagaagtctcatcagaatcggtggtgatggaagtaaaattgtagtgacaacacgtagtcattctattgcttctatgatgggtactgttccttctcacgatttagaatgcctttctttggaagattccttatctttgttcgttaaatgggcttttaaagaaggagaagaggaaaagcaccccaatttagtcacaattggaaaagaaattgtgaggaagtgtagaggagttcctttggcaataagaacattggcaagtttactattttcaaaatatgacataaatgtttgggaatcacttagagatgatgagatttggaatttaccacagaaaaaggatgacatcttacctgcactaaaattaagttatgatcaaatgccatcctatttgaggaaatgtttttctatgttctcactttttccaaaggattttgattttcagactcgtcatgttctttcactttggagtgcactagatttgcttccatcaccaagcaaaaatgaaacttcattcgatgttgcaaatcgatatttaagtgaattaatttcgagatcttttcttgaaaatgtttgtgacttaggcacacactattactttaatatacatgatttagtgcatgatcttgcaCTATATGTTGCAAAAGATGAATGCCTAGTAATTAGTTCTGAGAGTCAAAATATACCAAAAAATGTTCTCCATATATCGTTTTTTGAATTTGATATGTTTCTCAAATCCTTCAAACCAAGTTTGTTAGGTGTGAGAACCATTGCAGTTCCAACTGAAGAACATATAGGTATAGGAGACAATAATGAAGATTTGTTCCCTACATGGGTGTTAAATTGCAAATACTTGCGATATTTGGATCTAGCTGATTCTACATTTGAGATTCTACCTCGATCAATCAGCAA 1739 0.18 MAESFIFSIAESLITKLASLAYQEASRVEQNHQLREWLKQIKLIFNDAENVLDQVDCETLRNQVIRDYGTPKDKVGRFFSSSNPLVFRYKLALQIKDIRKRLDRVAADRDKFGLQVIDVDRRVVHRREMTYSHVVESDVIGRAHDKEKIVKLLMEPSLDNNGDSKHISVIPIVGIGGLGKTTLAKLVFNDERIRESFPMKMWVCVSDDFDIKQLIIKIINAVTVSGANSADALVAQQTLRDMDIEQLQYLLRNKLTGQKFLLVLDDVWSEDRAKWVELRSLIRIGGDGSKIVVTTRSHSIASMMGTVPSHDLECLSLEDSLSLFVKWAFKEGEEEKHPNLVTIGKEIVRKCRGVPLAIRTLASLLFSKYDINVWESLRDDEIWNLPQKKDDILPALKLSYDQMPSYLRKCFSMFSLFPKDFDFQTRHVLSLWSALDLLPSPSKNETSFDVANRYLSELISRSFLENVCDLGTHYYFNIHDLVHDLALYVAKDECLVISSESQNIPKNVLHISFFEFDMFLKSFKPSLLGVRTIAVPTEEHIGIGDNNEDLFPTWVLNCKYLRYLDLADSTFEILPRSIS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00393 579 PANTHER OS05G0492600 PROTEIN 28 576 - -
Aip06g00393 579 Gene3D - 120 307 IPR027417 -
Aip06g00393 579 Pfam NB-ARC domain 158 401 IPR002182 GO:0043531
Aip06g00393 579 Gene3D - 399 488 IPR036388 -
Aip06g00393 579 Gene3D - 9 96 - -
Aip06g00393 579 PRINTS Disease resistance protein signature 351 365 - -
Aip06g00393 579 PRINTS Disease resistance protein signature 254 268 - -
Aip06g00393 579 PRINTS Disease resistance protein signature 169 184 - -
Aip06g00393 579 PRINTS Disease resistance protein signature 556 572 - -
Aip06g00393 579 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 413 IPR027417 -
Aip06g00393 579 PANTHER DISEASE RESISTANCE PROTEIN RP 28 576 IPR044974 GO:0006952
Aip06g00393 579 Gene3D - 314 398 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00393 Aip-Chr6 4593902 4642257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00393 167 368 WRKY Transcription Factor Family AT5G45050 26.316 1.65e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00393 - - pvu:PHAVU_001G134400g 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00393 06 4593902 4642257 Aip06g00393 06 4593902 4642257 ECH