Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00374 ATGCTTGAACAGAACTCTCACCTTAGGTCACCACTATTGTTATGTGTATCCATCTGCTTCTTGCTATATCCTGTTGTGAGGGCTGACATACCAGTAGGTTCTAAGCTTTGTGTGGTTGACAATGGCAGCTGGGTTTCCAAAAATGGTAATTTTGCAGTCGGGTTCTTTAACATTTCGGATGAACCTAACCAGTTTAGTATTGGTATTCGATTCAACAACAAGTCTATACCATATAGCCAACAAACAATGGTGTGGACTGCTGGATTTCAGACTGCAGTAGGTAACAAGTCTTGTTTCCAAATCACCACAAATGGAGATATGATCCTGTTTGATGATCAAGGAATGATAGCATGGAACAGCAACACCAGTAACAAGGGTGTCGTGTCGGCTTCTCTTCTTGATAATGGTAATCTTGTTCTGATGGACAGAGAGCAAAAGATAATTTGGCAAAGTTTTGATGATCCAGATGATACACTTCTCCCTGGACAGTATCTATCTTGTGATAAATCGCTTCGTGCTGCCACTAAGGATGCATATCTGACAAACAATGGAGCTCTACAACTTTTAGACAACAGTTCTAATGTTGTTTGGAGTGTGTTTGGGGAAGACCACAATGAATCTGTGAGCTACCGATTTCTTAGGATAGATGTCGATGGCAATCTCCGCCTATATTCATGGGTGGAGGCTTCACAGTCATGGAGATCTGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTTTTTGCAACTTGTGGTAAACAAGGGGTCTGTGTTTTGTCTCCCTCAGGTACTGCTGATTGTGTGTGTCCTTTCGAGCAGACCGACACCGGGACCTGTTTGGTTCCATATGAACAGAAGTGTGAGCCTGGCTCCACTATGATGACATATTGGAACACACACCTATATGGAATTTACCCTGTTGATGGTCCAGGTATCATAAGTAGCCTGCATCAATGTATGCAATTGTGCCAGAATGATTCAAGGTGTACGGTCGCAACCTTTTCTAATGATGGTGTTCCCCAATGCTCAATAAAGAAATCTGAATATGTCACTGGTTATTCAGATCCATCTCTAAGCTCAGTATCATTTGTTAAGAGATGTTCATTTCCATTTGCAGTAAATCCCACACTTGGAAGCTCACCTCCAACCAAACGAGCTCCTAGTTTTTGTGTTCCTTGTCTAATAGGAGCAGCCTCAGGCACATGTTTCGTTGTTGTTATCATTCAGCTTGGAATTGTTTTCTACATCTATAGAAGAAAAATTTCTACTAGGAGGAAAGAAAATTTAGCTTCCGCAGGTGCAAATTCAAAGGGCTTAGTTGCATTATCTTTTTCAGAGATCAAGAGCCTCACCGAAGACTTCAAGGATCAGATTGGACCAAATATGTTCAAGGGCATGCTACCAAACAAATCTCTTGTTGCAGTTAAAGAGCTGAATGCACCCATAGATGACAGGAAGTTTCGGAGTGCTGTTCTGAAGATTGGAAGCATCCACCACAGGAATCTTGTGAAGCTGGAGGGCTATTGTTGTGAGTTCAATCATAGATTCTTAGTCTACGAGTACGCCAAAAACGGTTCTTTAGAGAAGTATATAGACGATTCCCCTCTTTGCAAGAAACTGACTTGGAGAAAGAGAGTTGACATCTGCTCAAGTGTGGCCAAGGCCATCAATTATCTTCACTCTGAATGCAGGGAGTTTATAAGCCATGGAAATCTGAAGTGTGAAAATGTCATGTTGGATGAGAACTTAGAAGCCAAGGTGAGTGAATTTGGGTTCGCAATAGTAGACGGCGAGGCTGTGTACTCCGGCTTTTCGGCCGAGAGGGACATAGCAGATTTCGGCATGTTAGTCCTAACCTTGTTGACCGGATGTAGAGATCAGACAGAACTTTGTGAGTGGTCATATAAAGAATGGATAGAAGGGAATGCTGCAAATGTCATTGATAAAAGAATTGAAGGTGGTGCCAACCCAAATGAACTTGAACGGGTGTTGAGAATTGCATTCTGGTGCCTACAAAGCGATGAACGTCAAAGACCTTCAATGTTGGAGGTAGTGAGAGTATTAGATGGAACATTGAGTGTTGATCCAGCACCACCTCCATTTTCTGGCCACAGACCATTGCTGGAAGAATCTGAGACACAAGAAGATGATGTTTCAGAATCTGACATTCAGTAG 2172 0.4245 MLEQNSHLRSPLLLCVSICFLLYPVVRADIPVGSKLCVVDNGSWVSKNGNFAVGFFNISDEPNQFSIGIRFNNKSIPYSQQTMVWTAGFQTAVGNKSCFQITTNGDMILFDDQGMIAWNSNTSNKGVVSASLLDNGNLVLMDREQKIIWQSFDDPDDTLLPGQYLSCDKSLRAATKDAYLTNNGALQLLDNSSNVVWSVFGEDHNESVSYRFLRIDVDGNLRLYSWVEASQSWRSVWQAVENQCKVFATCGKQGVCVLSPSGTADCVCPFEQTDTGTCLVPYEQKCEPGSTMMTYWNTHLYGIYPVDGPGIISSLHQCMQLCQNDSRCTVATFSNDGVPQCSIKKSEYVTGYSDPSLSSVSFVKRCSFPFAVNPTLGSSPPTKRAPSFCVPCLIGAASGTCFVVVIIQLGIVFYIYRRKISTRRKENLASAGANSKGLVALSFSEIKSLTEDFKDQIGPNMFKGMLPNKSLVAVKELNAPIDDRKFRSAVLKIGSIHHRNLVKLEGYCCEFNHRFLVYEYAKNGSLEKYIDDSPLCKKLTWRKRVDICSSVAKAINYLHSECREFISHGNLKCENVMLDENLEAKVSEFGFAIVDGEAVYSGFSAERDIADFGMLVLTLLTGCRDQTELCEWSYKEWIEGNAANVIDKRIEGGANPNELERVLRIAFWCLQSDERQRPSMLEVVRVLDGTLSVDPAPPPFSGHRPLLEESETQEDDVSESDIQ 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00374 723 CDD B_lectin 45 155 IPR001480 -
Aip06g00374 723 ProSiteProfiles Protein kinase domain profile. 425 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00374 723 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 8 177 - -
Aip06g00374 723 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 178 717 - -
Aip06g00374 723 SUPERFAMILY alpha-D-mannose-specific plant lectins 177 235 IPR036426 -
Aip06g00374 723 Pfam PAN domain 312 355 IPR003609 -
Aip06g00374 723 Gene3D Hepatocyte Growth Factor 300 368 - -
Aip06g00374 723 Gene3D - 169 259 - -
Aip06g00374 723 PIRSF SRK 596 723 IPR024171 GO:0004674
Aip06g00374 723 PIRSF SRK 4 186 IPR024171 GO:0004674
Aip06g00374 723 PIRSF SRK 174 601 IPR024171 GO:0004674
Aip06g00374 723 MobiDBLite consensus disorder prediction 694 723 - -
Aip06g00374 723 SUPERFAMILY Protein kinase-like (PK-like) 462 687 IPR011009 -
Aip06g00374 723 Pfam S-locus glycoprotein domain 192 271 IPR000858 GO:0048544
Aip06g00374 723 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 169 IPR036426 -
Aip06g00374 723 Gene3D Phosphorylase Kinase; domain 1 415 520 - -
Aip06g00374 723 Pfam Protein tyrosine and serine/threonine kinase 468 592 IPR001245 GO:0004672|GO:0006468
Aip06g00374 723 ProSiteProfiles Bulb-type lectin domain profile. 36 153 IPR001480 -
Aip06g00374 723 Pfam D-mannose binding lectin 82 170 IPR001480 -
Aip06g00374 723 SMART blect_4 35 155 IPR001480 -
Aip06g00374 723 Gene3D - 29 152 IPR036426 -
Aip06g00374 723 Gene3D Transferase(Phosphotransferase) domain 1 601 696 - -
Aip06g00374 723 Gene3D Transferase(Phosphotransferase) domain 1 521 600 - -
Aip06g00374 723 PANTHER OS07G0415500 PROTEIN 178 717 - -
Aip06g00374 723 PANTHER OS07G0415500 PROTEIN 8 177 - -
Aip06g00374 723 ProSiteProfiles PAN/Apple domain profile. 286 366 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00374 Aip-Chr6 4424837 4427023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00374 333 697 Receptor kinase-like Gene Family AT4G05200 25.472 1.58e-40 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip06g00374 PK_Tyr_Ser-Thr 4.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00374 - - gmx:100809478 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00374 06 4424837 4427023 Aip06g00374 06 4424837 4427023 ECH