Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00357 ATGGAGACAGATAACAACAGTGAGTCAAAGTCAAAGAAGATGGAAGACTATGAGGTGATAGAGCAAATTGGAAGAGGAGCATTTGGTTCTGCTTTTCTGGTTCTTCACAAGTCTGAGAAGAAGAGATATGTGCTGAAAAAGATTCGCTTGGCAAAGCAAACTGAGAAGTTCAAACTTACAGCACACCAAGAGATGAATCTGATTGCAAAACTAAATAACCCATATATTGTGGAATACAAAGATGCTTGGGTGGAGAAGGAGGACCATATATGCATTGTTACTGGCTACTGTGAAGGAGGTGACATGGCTGAGTACATAAAGAAATCGCGCGGATCATTTTTCCCTGAGGAGAAGGTTTGCAAATGGCTCACTCAATTGTTGATAGCTGTGGACTACTTGCACTCTAATCGTGTGATCCATAGAGATCTTAAGTGTTCCAACATATTCCTCACAAAAGACAATAACATTCGGCTTGGTGACTTTGGTCTTGCGAAACGGCTTAATCCAGAAGATCTTGCTTCCTCGATTGTTGGAACTCCAAATTATATGTGCCCTGAGCTTCTAGCTGATATACCTTATGGTTATAAATCTGACATGTGGTCGCTCGGTTGCTGCATGTTTGAGATTGCTGGACACCAACCGGCATTTCGTGCTCCGGACATGGCTGGACTTATTAATAAAATTAACAGATCCTCCATTTCTCCATTGCCAATTATTTATTCTTCCACACTGAAACAACTTATTAAGAGCATGCTGAGGAAAAACCCAGAACATAGACCAACAGCTGCTGAATTGTTACGCCATCCTCTTTTACAGCCTTATGTTCTCCGCTGTCAAAACGCATCATCCAATTTTCTTCCAGTATACCCCATAGTTAACTCAAAGGATAAAACAAAAAGATCTAAAAAATCTAGTGGTGGCAAGGACCAGAGGGACAAAGACACAACATCACCAAATTATTTGGAAAGGATTCATCCGATTGAGGGAAATGGACACTTACAGCCGAGGAATCTTCCAAGTGAGGGAGAGCTAACAGCTTCAACAAGTGCAGAAGACAACCTCGAGAACCGGATGGTTGATCTTACAAGCTATATAGTGGAATCTTCTACTAGTATTAGTGGCTCAAAAGATGGATCAACAACATCAGAATCAACTATTTGTAGTGTGTGTAGGGACCCTGACTTTAAAACTAGGCCTGCAAAGGAAACTGCAAATATTGAAATCACTTCAAAGAGTACACAAGATTCTGTGCATCAAGATCATGAATTTGCTGCTGAACTTCTTCAAAACTTAGAAGGGATTGACATAAATGCTGTTACAACACTAGTTGAAGATGCTTTTTCTGATGACGGTGCTAACAATGCTGAAGCAGATAGAGAAGATGCCAAACTTGAAGACTCAAGGAAATCAGCTTCTTCCAGTGCTGAAGCACAGAGAGAAGATGCCAAACTTGTGGACTCCATGAAATCAACAACTTCCAGTGCAGGCACCAGCAGCATTGGTAAAGATAAGTCCATTGATGAGGAAAGGTTGTTGCTGATTCTGCATCCTGTTAAGGTTGAATGTGACACCAAATCCGGAACCAGCTTGAAGGAAATCGAAAATCCTGATGCATCGAAGGAAGGCTCACAATTGAACTACTTGTCATCTGAAAGTAATGATACTCCTCCAATCAAGGATGAATGCTCCATGCATAAAGATGAAAATGCCAATGCAGTTGATCAGACACTGAATGGCATTTCGTTAAGCACTTCGACAATCAGCGACGAAACAACGAAGTCTGAGTTGGATAGTCCCTCCCAGCAAAGGGCTGAGGCTCTTGAATCTCTGCTTGAGTTATGTGCTCAGCTACTCAAGCAAGATAAGCTCGAAGAGCTTGCGGCTGTGCTAAGACCGTTCGGAAAAGAAGCTGTCTCATCCAGAGAAACAGCAATATGGCTGACAAAGAGCCTTATATCAGCACAGAAGTTCAATCCTGAAAGCTAG 1986 0.4179 METDNNSESKSKKMEDYEVIEQIGRGAFGSAFLVLHKSEKKRYVLKKIRLAKQTEKFKLTAHQEMNLIAKLNNPYIVEYKDAWVEKEDHICIVTGYCEGGDMAEYIKKSRGSFFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNNIRLGDFGLAKRLNPEDLASSIVGTPNYMCPELLADIPYGYKSDMWSLGCCMFEIAGHQPAFRAPDMAGLINKINRSSISPLPIIYSSTLKQLIKSMLRKNPEHRPTAAELLRHPLLQPYVLRCQNASSNFLPVYPIVNSKDKTKRSKKSSGGKDQRDKDTTSPNYLERIHPIEGNGHLQPRNLPSEGELTASTSAEDNLENRMVDLTSYIVESSTSISGSKDGSTTSESTICSVCRDPDFKTRPAKETANIEITSKSTQDSVHQDHEFAAELLQNLEGIDINAVTTLVEDAFSDDGANNAEADREDAKLEDSRKSASSSAEAQREDAKLVDSMKSTTSSAGTSSIGKDKSIDEERLLLILHPVKVECDTKSGTSLKEIENPDASKEGSQLNYLSSESNDTPPIKDECSMHKDENANAVDQTLNGISLSTSTISDETTKSELDSPSQQRAEALESLLELCAQLLKQDKLEELAAVLRPFGKEAVSSRETAIWLTKSLISAQKFNPES 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00357 661 MobiDBLite consensus disorder prediction 487 501 - -
Aip06g00357 661 MobiDBLite consensus disorder prediction 296 319 - -
Aip06g00357 661 Pfam Protein kinase domain 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00357 661 CDD STKc_Nek 16 271 - -
Aip06g00357 661 MobiDBLite consensus disorder prediction 527 557 - -
Aip06g00357 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Aip06g00357 661 MobiDBLite consensus disorder prediction 539 557 - -
Aip06g00357 661 Gene3D Transferase(Phosphotransferase) domain 1 99 325 - -
Aip06g00357 661 MobiDBLite consensus disorder prediction 296 355 - -
Aip06g00357 661 MobiDBLite consensus disorder prediction 452 486 - -
Aip06g00357 661 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Aip06g00357 661 MobiDBLite consensus disorder prediction 340 355 - -
Aip06g00357 661 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00357 661 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 506 644 - -
Aip06g00357 661 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 11 490 - -
Aip06g00357 661 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g00357 661 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 11 490 - -
Aip06g00357 661 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 506 644 - -
Aip06g00357 661 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Aip06g00357 661 SUPERFAMILY Protein kinase-like (PK-like) 14 305 IPR011009 -
Aip06g00357 661 MobiDBLite consensus disorder prediction 450 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00357 Aip-Chr6 4165193 4170405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00357 10 272 MAP Kinase Kinase Kinase AT3G13530 32.075 1.96e-37 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aip06g00357 Pkinase 1.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00357 K08857 - gmx:100793379 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00357 06 4165193 4170405 Aip06g00357 06 4165193 4170405 ECH
Aip06g00357 06 4165193 4170405 Aip02g01798 02 78450354 78459677 PCT