Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00339 ATGGCAGACTTACAATCCTACATTCAAGTGTTGTTAATTTGCGCAGTTTCTACCATCTTCATTGGATCCATAATACTAAGAAAAAGAAAGCAAAACCATTCTTCTTTGCCGCTTCCGCCGGGTCCAAAAGCCCTACCAATCATTGGCCACCTCCACCTCCTCTCATCAACACCACACCAAGATTTCTACAAGTTCTCAACCCGCTATGGACCCATCATTCACCTCTACCTCGGCTCCGCCCCTTGCGTCGTGGTGTCCACCGCCGAGGCAGCTAGGGAATTCCTTAAAACACACGAAACCTCCTTCTCCGACCGCCCCGCGCAGACAGTGGCCATAGAGACCCTAACTTACGGCTTCAAGGACTTTTTGTTTGCCCCGTACGGACCTTACTGGAAATTCATGAAGAAGGTGTGCATGTCGGAGCTCCTCGGCGGCAAAATGCTCCATCAGCTCCTCCACGTGCGGCAGCAAGAGACAAGGAGGTTCCTTAGCGTGTTGGTGAAGAAAGGGGTGGCTGGTGAGGCCGTGGATGTCGGGGCACAACTCATGACTCTCTCCAACAACATTGTTTCAAGGATGATTATGAGGCAGACGAGTTGTGGGGACGGAGAGAGTGACGAGGAGGTGGTGAGGAAGCTGGTGGCGGACACGGCGGAGCTGACGGGGAAGTTCAACTTGTCGGACTTCTTGTGGTTCTTGAAGGATCTTGATGTTCAGGGATTCAAGAAGAAACTCAAGGAGATTCGGGTAAGGTTCGATGGCTTGCTGGACAGAGCGATTGAGGAGCATAAACATGAAAGTAAAAAGAACAAGGGTGAGGGTGCAAGGGATATACTTGATGTTCTTCTTCACATATCTGAAGATGAAACCGCTGATATCAAATTGGATACCGAAAACATCAAGGCCTTCATAATGGACATACTTGTGGCAGGGACAGATACAACGGCTGTGACAATGGAATGGGCGATGGCAGAGTTAATGAAGAATCCAGACGTTATGGAGAAAGCGCGTCAAGAGGTGGATTCGGTGGTTGGAAAGAAGAGGATTGTTGAAGAATCGGACATTCCCAACCTTGCTTACATTCAAGCCATTGTGAAAGAAACACTAAGGCTTCACCCTGCAGGCCCATTGCTATTCAGGCAGTGTTCTAGAAGGGCCATAGTAAATGGTTACGAGATTCCAGCAAAGTGTCGGTTGTTCGTGAATGTGTGGGCCATTGGTAGGGACCCTAACCACTGGGAGAATCCGTTGGAGTTCAGGCCCGAGAGATTCATTGGGAAACATATGGATGTAAGAGGACAGCAATATGAGTTGATTCCATTTGGGAGTGGAAGAAGAATGTGCCCTGGAATCTCTCTGGCTTTGCAAATTGCGCATGTCACTCTCGCTGCCATGATTCAGTGCTTTGAATGGAAGCTTCATGATGATGAAAAGATCCTTGACATGGAAGAGAAGCCTGCTGGAATTGTTAATCCGAGGGCTCACCCTCTCATTGCTCTCCCACTTCCAAGGCTTAATCCTTTTCCTTCTATATCACAAGATATATAA 1548 0.4839 MADLQSYIQVLLICAVSTIFIGSIILRKRKQNHSSLPLPPGPKALPIIGHLHLLSSTPHQDFYKFSTRYGPIIHLYLGSAPCVVVSTAEAAREFLKTHETSFSDRPAQTVAIETLTYGFKDFLFAPYGPYWKFMKKVCMSELLGGKMLHQLLHVRQQETRRFLSVLVKKGVAGEAVDVGAQLMTLSNNIVSRMIMRQTSCGDGESDEEVVRKLVADTAELTGKFNLSDFLWFLKDLDVQGFKKKLKEIRVRFDGLLDRAIEEHKHESKKNKGEGARDILDVLLHISEDETADIKLDTENIKAFIMDILVAGTDTTAVTMEWAMAELMKNPDVMEKARQEVDSVVGKKRIVEESDIPNLAYIQAIVKETLRLHPAGPLLFRQCSRRAIVNGYEIPAKCRLFVNVWAIGRDPNHWENPLEFRPERFIGKHMDVRGQQYELIPFGSGRRMCPGISLALQIAHVTLAAMIQCFEWKLHDDEKILDMEEKPAGIVNPRAHPLIALPLPRLNPFPSISQDI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00339 515 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 Pfam Cytochrome P450 39 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 509 - -
Aip06g00339 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 509 - -
Aip06g00339 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Aip06g00339 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00339 515 SUPERFAMILY Cytochrome P450 32 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00339 Aip-Chr6 3920518 3922367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00339 1 504 Cytochrome P450 AT5G06900 48.814 1.15e-175 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00339 K24188 - gmx:100815706 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00339 06 3920518 3922367 Aip06g00339 06 3920518 3922367 ECH
Aip06g00339 06 3920518 3922367 Aip02g01823 02 79615941 79619892 PCT
Aip02g01827 02 79877832 79882435 Aip06g00339 06 3920518 3922367 PCT