Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00338 ATGGCTGATTTACAAGACTACACTGCTCAAGTGTTGCTAATAATATCCACCATCTTGGTTGGATCCATAATAATAAGGAGAAGAAGAAAACAAAATCAAATAAAGCTTCCACCGAGCCCACCATCCCTACCCATCATTGGACACCTCCACCTCCTCTCTCCATTACCGCACCAAGATTTCCACAAGCTCTCAACCACCTATGGACCCATCATCCACCTCTACCTCGGCTCTGCCACTTGCGTGGTGGCTTCCACCGCTGAAGCTGCCAGAGAGTTCCTCAAAATTCACGAAACCTCCTTCTCCGACCGCCCCACACAAACCGTAGCCGTGGAGAGCCTATCCTATGGATTCAAAGGCTTCGTGTTCGCCCCGTACGGACCCTATTGGAAATTCATGAAGAAGGTGTGCATGTCGGAGCTCCTGGGCGGCAAAATGCTCCACCAGCTCCTCCACGTGAGGCAGCAAGAGAGGAAGAGGTTCCTTAGCGGTTTGGCGGAGAAAGGGTTGGCCGGTGAGGCAGTGGATGTTGGGGCAGAACTCATGATGCTGACCAACAACGTGATATCGATGATGACGATGAGGCAGAAGAGTTGTTCTGAGGGGGGAGGAGAAGCGGAGACGCTGAGAAAGGTGGTGGAGGACACGGTGGAGCTGAGCGGGAAGTTCAACGTGTCGGATTTCTTGTGGTTCATGAAGGGTGTTGATGTTCAGGGATTCAAGAAGAGGCTGAAGGAGATTCGGGTAAGGTTCGATGCCTTGCTGGACAGAGTGATTGAGGAGCATCAACGTGAAAGAAGAAAGAAGAAGGAACAGGGTTCGACAACCGGTGATGACGATGATGTTAAGGATATACTTGATGTCCTTCTTGACATATCCGAAGATGAAACTGCTGAAATCAAATTGGATACAGACAACATCAAAGCCTTCGTCATGGACATACTGGTGGGGGGGACTGACACAACAGCTGTGACAATGGAGTGGGCGATGGCTGAATTAATCAACAATCCTGGCGTTATGGAGAAAGCACGTGAAGAGATCGATGCAGTTGTTGGAAATAAGAACAGGATCGTTGAAGAATGTGACATTCCCAACCTCCCTTACATACAAGCCATTGTGAAAGAAACACTAAGGCTTCACCCTCCAGGTGCATTGATCGTGAGGGAATGTTCTAGAACTGCCACGGTTGATGGCTATCACATTCCAGCAAGGACTCGTTTGTTTATCAATGCATGGTCCATTGGAAGGGACCCAAACCATTGGGAGAATCCCCTTGACTTCAGGCCTGAGAGGTTCATCGATCAAAATGGTAGTGCGTTGACTCATTTGGATGTTAGGGGTCAACACTTTGAGTTGATTCCGTTCGGGAGTGGAAGAAGAATGTGCCCTGGAATTTCTCTGGCTTTGCCGCTTGCATATGTGACACTGGCTTCGATGCTTCAGTGTTTTGAATGGAAGCTTGTCAATGGTGGTGATGATGGGATCGTTGACATGGAAGAGAAGGCTGGGCTTGTTGTTCCCAGGGCTCACCCTGTTATCTGTGTCCCTCTGCCTAGGCTTTATCAATTTCCATCTATATGA 1578 0.4892 MADLQDYTAQVLLIISTILVGSIIIRRRRKQNQIKLPPSPPSLPIIGHLHLLSPLPHQDFHKLSTTYGPIIHLYLGSATCVVASTAEAAREFLKIHETSFSDRPTQTVAVESLSYGFKGFVFAPYGPYWKFMKKVCMSELLGGKMLHQLLHVRQQERKRFLSGLAEKGLAGEAVDVGAELMMLTNNVISMMTMRQKSCSEGGGEAETLRKVVEDTVELSGKFNVSDFLWFMKGVDVQGFKKRLKEIRVRFDALLDRVIEEHQRERRKKKEQGSTTGDDDDVKDILDVLLDISEDETAEIKLDTDNIKAFVMDILVGGTDTTAVTMEWAMAELINNPGVMEKAREEIDAVVGNKNRIVEECDIPNLPYIQAIVKETLRLHPPGALIVRECSRTATVDGYHIPARTRLFINAWSIGRDPNHWENPLDFRPERFIDQNGSALTHLDVRGQHFELIPFGSGRRMCPGISLALPLAYVTLASMLQCFEWKLVNGGDDGIVDMEEKAGLVVPRAHPVICVPLPRLYQFPSI 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00338 525 Pfam Cytochrome P450 37 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Aip06g00338 525 SUPERFAMILY Cytochrome P450 37 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 Coils Coil 339 359 - -
Aip06g00338 525 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 522 - -
Aip06g00338 525 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 522 - -
Aip06g00338 525 Gene3D Cytochrome P450 22 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g00338 525 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00338 Aip-Chr6 3906145 3907924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00338 1 518 Cytochrome P450 AT5G06900 45.769 1.63e-165 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00338 K24188 - gmx:100815706 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00338 06 3906145 3907924 Aip06g00338 06 3906145 3907924 ECH
Aip06g00338 06 3906145 3907924 Aip02g01827 02 79877832 79882435 PCT